PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022966709.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 1501aa MW: 164705 Da PI: 7.1085

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022966709.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.5	8.6e-10	923	963	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +WT eE ++ +av +G++ ++ I+r++g +++ qck ++ XP_022966709.1 923 SWTDEEKSIFMQAVSSYGKD-FDMISRCVG-SKSRDQCKVFFS 963 7***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1501 aa Download sequence
MPPEPLPWDR KDLFKERKHE KSEAIGSATR WRDSYHGSRE FNRWGSADFR RPTGHGKQGG 60 WHQFSEEASH GYGPSRSFSD RVVENESFRP SVPRGDGKNI RIGRESRDSS SYRDWRSYSR 120 ETTNGFGNPS RRPSSQDVSS DQRSVDDTAT HSSPQSDVVS VSDQIHSKDR NDKVGGACGS 180 ENGLRSDVEV SLGSTDWKPL KWSRSGSLSS RASAYSSSTN SKNEKADLPP RVSSLIESSS 240 AEATACVTSS LPFEDTISKK KPRLGWGDGL AKFEKEKVEA PDTNCASPAT PSSFACSSSS 300 GLEDKPFSKA ASVDGMKCSS PRSGSQNQLQ NFFLSLEKLE ISSIAKIGSS LVELFQSDDP 360 NTVESCFGKS TLNKLLAYKS DISKTLEMTE SEIDLLENEL KSLKSKNRGN VSRSKSCSAI 420 YVKESDGVSC ISPRHTSLKV VSTSDSTVEK MPVCKNVVGV EDVDTKDEEI DSPGTVMSKF 480 NEPTRTEVTD VIVSDKTGRS LSISEPFVDE CNECIRAKSC TGESICGDLM AQAASGSSLC 540 DLIFASNKEY ASKAAEVIFG SLPAEMFKIS SQSTNFVPCS ETEKLTKEKF LMRRQFLKFK 600 ESALTLRFKA LQHSWKEGLL HSVKKCRSKP QKKELSLRVT YSGHQKYRSS IRSRVVQHGA 660 CQNRARNSEI ATCYSSKLLS NPRVRRYRNI LKMPAMILDE NEKTALRFVS NNGLVEDPCA 720 VEKERSMINP WSLTERELFW EKLSLFGKDF RKISSFLSHK TTADCIQFYY KNHKSDSFKK 780 RKNLDLGKQM KSSTMTYMLT SGKKWNPGVN TTSLDILGVA SVMAAQEDSN IETQLTCARR 840 FDELQSEKET VAADVLVGIC GSISSEPMSS CVTSAIHPGE DYREPKCHKV DSVTKLPSTL 900 NAMQRTDNEP CSDDSSGDVD SSSWTDEEKS IFMQAVSSYG KDFDMISRCV GSKSRDQCKV 960 FFSKARKCLG LDLIRTSEDV GTPRSSNDAS GSGTDSEAHC VVEGARSSEE IGSKSVDGFS 1020 EFGESTAFQQ SDAKRAEAVG NLFSETSKEV EEDAPNLDSH SACNLANACA SPSQPEPVHD 1080 HKIEGSSENT EAGSNRCNEP NVLRSESMST VDENSTAISE SGAITKLAFG EEKGSNSNLH 1140 AQSILQCLVQ DSSGIDPQIS HPNFLKVDSV EKSYKLEVRD APKTPMNRDD YAERENHLSR 1200 HVGSSEFPCS HPFNKPIIED MNRTINHTSF PVVRALSKPD INCNSTYVAK EQECRLQNCN 1260 SSKLCHRSAE LPFSPPNVEF GHDHWKNTSR SGSASDSDVP CRKGDVKLFG QILSHAPSQQ 1320 NSSSGSNECG TKKGLHKSSS TYDMGENAPS RSYGFWDGSG LQTGLSAMPD SIVLQAKYPA 1380 AFSGYATTSV KTEQQPLLTL AKNDNQAYKT GDGVKKRPYP VDIFSEIHRR NGFDSLSLAS 1440 LQQQGRMIVG MNVVGRGGIL VGNSCTGISD PVAAIKMHYA KADQYVDGSW RGGNGDIGSS 1500 R

Sequence ? help Back to Top

Protein Sequence Length: 1501 aa Download sequence

MPPEPLPWDR KDLFKERKHE KSEAIGSATR WRDSYHGSRE FNRWGSADFR RPTGHGKQGG  60
WHQFSEEASH GYGPSRSFSD RVVENESFRP SVPRGDGKNI RIGRESRDSS SYRDWRSYSR  120
ETTNGFGNPS RRPSSQDVSS DQRSVDDTAT HSSPQSDVVS VSDQIHSKDR NDKVGGACGS  180
ENGLRSDVEV SLGSTDWKPL KWSRSGSLSS RASAYSSSTN SKNEKADLPP RVSSLIESSS  240
AEATACVTSS LPFEDTISKK KPRLGWGDGL AKFEKEKVEA PDTNCASPAT PSSFACSSSS  300
GLEDKPFSKA ASVDGMKCSS PRSGSQNQLQ NFFLSLEKLE ISSIAKIGSS LVELFQSDDP  360
NTVESCFGKS TLNKLLAYKS DISKTLEMTE SEIDLLENEL KSLKSKNRGN VSRSKSCSAI  420
YVKESDGVSC ISPRHTSLKV VSTSDSTVEK MPVCKNVVGV EDVDTKDEEI DSPGTVMSKF  480
NEPTRTEVTD VIVSDKTGRS LSISEPFVDE CNECIRAKSC TGESICGDLM AQAASGSSLC  540
DLIFASNKEY ASKAAEVIFG SLPAEMFKIS SQSTNFVPCS ETEKLTKEKF LMRRQFLKFK  600
ESALTLRFKA LQHSWKEGLL HSVKKCRSKP QKKELSLRVT YSGHQKYRSS IRSRVVQHGA  660
CQNRARNSEI ATCYSSKLLS NPRVRRYRNI LKMPAMILDE NEKTALRFVS NNGLVEDPCA  720
VEKERSMINP WSLTERELFW EKLSLFGKDF RKISSFLSHK TTADCIQFYY KNHKSDSFKK  780
RKNLDLGKQM KSSTMTYMLT SGKKWNPGVN TTSLDILGVA SVMAAQEDSN IETQLTCARR  840
FDELQSEKET VAADVLVGIC GSISSEPMSS CVTSAIHPGE DYREPKCHKV DSVTKLPSTL  900
NAMQRTDNEP CSDDSSGDVD SSSWTDEEKS IFMQAVSSYG KDFDMISRCV GSKSRDQCKV  960
FFSKARKCLG LDLIRTSEDV GTPRSSNDAS GSGTDSEAHC VVEGARSSEE IGSKSVDGFS  1020
EFGESTAFQQ SDAKRAEAVG NLFSETSKEV EEDAPNLDSH SACNLANACA SPSQPEPVHD  1080
HKIEGSSENT EAGSNRCNEP NVLRSESMST VDENSTAISE SGAITKLAFG EEKGSNSNLH  1140
AQSILQCLVQ DSSGIDPQIS HPNFLKVDSV EKSYKLEVRD APKTPMNRDD YAERENHLSR  1200
HVGSSEFPCS HPFNKPIIED MNRTINHTSF PVVRALSKPD INCNSTYVAK EQECRLQNCN  1260
SSKLCHRSAE LPFSPPNVEF GHDHWKNTSR SGSASDSDVP CRKGDVKLFG QILSHAPSQQ  1320
NSSSGSNECG TKKGLHKSSS TYDMGENAPS RSYGFWDGSG LQTGLSAMPD SIVLQAKYPA  1380
AFSGYATTSV KTEQQPLLTL AKNDNQAYKT GDGVKKRPYP VDIFSEIHRR NGFDSLSLAS  1440
LQQQGRMIVG MNVVGRGGIL VGNSCTGISD PVAAIKMHYA KADQYVDGSW RGGNGDIGSS  1500
R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-98	MYB family protein