PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022966707.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 1536aa MW: 168479 Da PI: 7.1323

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022966707.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.4	8.8e-10	958	998	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +WT eE ++ +av +G++ ++ I+r++g +++ qck ++ XP_022966707.1 958 SWTDEEKSIFMQAVSSYGKD-FDMISRCVG-SKSRDQCKVFFS 998 7***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1536 aa Download sequence
MPPEPLPWDR KDLFKERKHE KSEAIGSATR WRDSYHGSRE FNRWGSADFR RPTGHGKQGG 60 WHQFSEEASH GYGPSRSFSD RVVENESFRP SVPRGDGKNI RIGRESRDSS SYRDWRSYSR 120 ETTNGFGNPS RRPSSQDVSS DQRSVDDTAT HSSPQSDVVS VSDQIHSKDR NDKVGGACGS 180 ENGLRSDVEV SLGSTDWKPL KWSRSGSLSS RASAYSSSTN SKNEKADLPP RVSSLIESSS 240 AEATACVTSS LPFEDTISKK KPRLGWGDGL AKFEKEKVEA PDTSMRKEGT LLSSISAELT 300 HSLGSHFSEK SPKTLPFSDC ASPATPSSFA CSSSSGLEDK PFSKAASVDG MKCSSPRSGS 360 QNQLQNFFLS LEKLEISSIA KIGSSLVELF QSDDPNTVES CFGKSTLNKL LAYKSDISKT 420 LEMTESEIDL LENELKSLKS KNRGNVSRSK SCSAIYVKES DGVSCISPRH TSLKVVSTSD 480 STVEKMPVCK NVVGVEDVDT KDEEIDSPGT VMSKFNEPTR TEVTDVIVSD KTGRSLSISE 540 PFVDECNECI RAKSCTGESI CGDLMAQAAS GSSLCDLIFA SNKEYASKAA EVIFGSLPAE 600 MFKISSQSTN FVPCSETEKL TKEKFLMRRQ FLKFKESALT LRFKALQHSW KEGLLHSVKK 660 CRSKPQKKEL SLRVTYSGHQ KYRSSIRSRV VQHGACQNRA RNSEIATCYS SKLLSNPRVR 720 RYRNILKMPA MILDENEKTA LRFVSNNGLV EDPCAVEKER SMINPWSLTE RELFWEKLSL 780 FGKDFRKISS FLSHKTTADC IQFYYKNHKS DSFKKRKNLD LGKQMKSSTM TYMLTSGKKW 840 NPGVNTTSLD ILGVASVMAA QEDSNIETQL TCARRFDELQ SEKETVAADV LVGICGSISS 900 EPMSSCVTSA IHPGEDYREP KCHKVDSVTK LPSTLNAMQR TDNEPCSDDS SGDVDSSSWT 960 DEEKSIFMQA VSSYGKDFDM ISRCVGSKSR DQCKVFFSKA RKCLGLDLIR TSEDVGTPRS 1020 SNDASGSGTD SEAHCVVEGA RSSEEIGSKS VDGFSEFGES TAFQQSDAKR AEAVGNLFSE 1080 TSKEVEEDAP NLDSHSACNL ANACASPSQP EPVHDHKIEG SSENTEAGSN RCNEPNVLRS 1140 ESMSTVDENS TAISESGAIT KLAFGEEKGS NSNLHAQSIL QCLVQDSSGI DPQISHPNFL 1200 KVDSVEKSYK LEVRDAPKTP MNRDDYAERE NHLSRHVGSS EFPCSHPFNK PIIEDMNRTI 1260 NHTSFPVVRA LSKPDINCNS TYVAKEQECR LQNCNSSKLC HRSAELPFSP PNVEFGHDHW 1320 KNTSRSGSAS DSDVPCRKGD VKLFGQILSH APSQQNSSSG SNECGTKKGL HKSSSTYDMG 1380 ENAPSRSYGF WDGSGLQTGL SAMPDSIVLQ AKYPAAFSGY ATTSVKTEQQ PLLTLAKNDN 1440 QAYKTGDGVK KRPYPVDIFS EIHRRNGFDS LSLASLQQQG RMIVGMNVVG RGGILVGNSC 1500 TGISDPVAAI KMHYAKADQY VDGSWRGGNG DIGSSR

Sequence ? help Back to Top

Protein Sequence Length: 1536 aa Download sequence

MPPEPLPWDR KDLFKERKHE KSEAIGSATR WRDSYHGSRE FNRWGSADFR RPTGHGKQGG  60
WHQFSEEASH GYGPSRSFSD RVVENESFRP SVPRGDGKNI RIGRESRDSS SYRDWRSYSR  120
ETTNGFGNPS RRPSSQDVSS DQRSVDDTAT HSSPQSDVVS VSDQIHSKDR NDKVGGACGS  180
ENGLRSDVEV SLGSTDWKPL KWSRSGSLSS RASAYSSSTN SKNEKADLPP RVSSLIESSS  240
AEATACVTSS LPFEDTISKK KPRLGWGDGL AKFEKEKVEA PDTSMRKEGT LLSSISAELT  300
HSLGSHFSEK SPKTLPFSDC ASPATPSSFA CSSSSGLEDK PFSKAASVDG MKCSSPRSGS  360
QNQLQNFFLS LEKLEISSIA KIGSSLVELF QSDDPNTVES CFGKSTLNKL LAYKSDISKT  420
LEMTESEIDL LENELKSLKS KNRGNVSRSK SCSAIYVKES DGVSCISPRH TSLKVVSTSD  480
STVEKMPVCK NVVGVEDVDT KDEEIDSPGT VMSKFNEPTR TEVTDVIVSD KTGRSLSISE  540
PFVDECNECI RAKSCTGESI CGDLMAQAAS GSSLCDLIFA SNKEYASKAA EVIFGSLPAE  600
MFKISSQSTN FVPCSETEKL TKEKFLMRRQ FLKFKESALT LRFKALQHSW KEGLLHSVKK  660
CRSKPQKKEL SLRVTYSGHQ KYRSSIRSRV VQHGACQNRA RNSEIATCYS SKLLSNPRVR  720
RYRNILKMPA MILDENEKTA LRFVSNNGLV EDPCAVEKER SMINPWSLTE RELFWEKLSL  780
FGKDFRKISS FLSHKTTADC IQFYYKNHKS DSFKKRKNLD LGKQMKSSTM TYMLTSGKKW  840
NPGVNTTSLD ILGVASVMAA QEDSNIETQL TCARRFDELQ SEKETVAADV LVGICGSISS  900
EPMSSCVTSA IHPGEDYREP KCHKVDSVTK LPSTLNAMQR TDNEPCSDDS SGDVDSSSWT  960
DEEKSIFMQA VSSYGKDFDM ISRCVGSKSR DQCKVFFSKA RKCLGLDLIR TSEDVGTPRS  1020
SNDASGSGTD SEAHCVVEGA RSSEEIGSKS VDGFSEFGES TAFQQSDAKR AEAVGNLFSE  1080
TSKEVEEDAP NLDSHSACNL ANACASPSQP EPVHDHKIEG SSENTEAGSN RCNEPNVLRS  1140
ESMSTVDENS TAISESGAIT KLAFGEEKGS NSNLHAQSIL QCLVQDSSGI DPQISHPNFL  1200
KVDSVEKSYK LEVRDAPKTP MNRDDYAERE NHLSRHVGSS EFPCSHPFNK PIIEDMNRTI  1260
NHTSFPVVRA LSKPDINCNS TYVAKEQECR LQNCNSSKLC HRSAELPFSP PNVEFGHDHW  1320
KNTSRSGSAS DSDVPCRKGD VKLFGQILSH APSQQNSSSG SNECGTKKGL HKSSSTYDMG  1380
ENAPSRSYGF WDGSGLQTGL SAMPDSIVLQ AKYPAAFSGY ATTSVKTEQQ PLLTLAKNDN  1440
QAYKTGDGVK KRPYPVDIFS EIHRRNGFDS LSLASLQQQG RMIVGMNVVG RGGILVGNSC  1500
TGISDPVAAI KMHYAKADQY VDGSWRGGNG DIGSSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-108	MYB family protein