PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022966101.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 383aa MW: 41155.9 Da PI: 4.7956

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022966101.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.2	7e-17	61	106	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l ++v ++G ++W++Iar + gR++k+c++rw + XP_022966101.1 61 KGPWSPEEDAILSRLVSKFGARNWSLIARGIA-GRSGKSCRLRWCNQ 106 79****************************.*********985 PP
2	Myb_DNA-binding	56.9	4.6e-18	113	157	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T eEd ++v a++ +G++ W++Iar ++ gRt++ +k++w++ XP_022966101.1 113 RKPFTDEEDRIIVAAHAVHGNK-WAAIARLLP-GRTDNAIKNHWNST 157 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MEAASAAAAA EVDATVAEGG GVDACDDAVV SVADCASGDD AVPMVGEGES TGGRGGKDRV 60 KGPWSPEEDA ILSRLVSKFG ARNWSLIARG IAGRSGKSCR LRWCNQLDPS VKRKPFTDEE 120 DRIIVAAHAV HGNKWAAIAR LLPGRTDNAI KNHWNSTLRR RCTELERIKL ESGNTVDDAS 180 LEKTKGSSEE TLSCGDVNSF KSLEGKDTCS REHIDDQFED KVPIAIEGQF SHEVKEQEQP 240 TLFRPVARVS AFSVYNPLDG QESLRAFLRP VPMQGPLIQA STPDVEASKL LEGVYCDRSV 300 PHQCGHGCCE SYNQGSTMDS LLGPEFVDFS EPPPSFTSFE LAAIATDISN LAWLKSGLEN 360 GSVRAMGDSA GRLNGSQMQV GRL

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MEAASAAAAA EVDATVAEGG GVDACDDAVV SVADCASGDD AVPMVGEGES TGGRGGKDRV  60
KGPWSPEEDA ILSRLVSKFG ARNWSLIARG IAGRSGKSCR LRWCNQLDPS VKRKPFTDEE  120
DRIIVAAHAV HGNKWAAIAR LLPGRTDNAI KNHWNSTLRR RCTELERIKL ESGNTVDDAS  180
LEKTKGSSEE TLSCGDVNSF KSLEGKDTCS REHIDDQFED KVPIAIEGQF SHEVKEQEQP  240
TLFRPVARVS AFSVYNPLDG QESLRAFLRP VPMQGPLIQA STPDVEASKL LEGVYCDRSV  300
PHQCGHGCCE SYNQGSTMDS LLGPEFVDFS EPPPSFTSFE LAAIATDISN LAWLKSGLEN  360
GSVRAMGDSA GRLNGSQMQV GRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G09230.1	1e-103	MYB family protein