PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022965905.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 244aa MW: 27136.7 Da PI: 7.6602

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022965905.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.9	2e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde+l+ +++++G+g +W + ++++g++R++k+c++rw++yl XP_022965905.1 14 KGPWSPEEDEKLKAYIQLHGTGgNWIALPNKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	41	4.5e-13	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd+++ +++ G++ W+ Ia+ ++ gRt++++k++w++ XP_022965905.1 69 GGFSEEEDDIICKLFISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MGRAPCCDKD NVKKGPWSPE EDEKLKAYIQ LHGTGGNWIA LPNKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDDIIC KLFISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGT 120 PKHVSSRKTA QTVTSSAMER LQLQKQLQGF QTAFSFDSTS TLWPPVSADG SLVNGECSLE 180 GCTGKSPVGS SSAEKEMNDC QESLFWWCND FDTNSAAASN LWETTTALQS DGILQDFELL 240 GHTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	2e-87	MYB family protein