PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022965523.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 344aa    MW: 38382.7 Da    PI: 7.6954
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022965523.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA96.53e-30203256458
       CBFB_NFYA   4 lYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +YVNaKQy++I++RR++Rakle+++k+ +++rkpylheSRh+hA++R RgsgGrF
  XP_022965523.1 203 IYVNAKQYHGIIRRRKSRAKLEAQNKV-IRNRKPYLHESRHRHAVNRVRGSGGRF 256
                     9**************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MMAIPRENFA QKNLDQNSVH LLFPYTVDSM PWRNSNEQKI QMALSDNITL KNETLPQPHH  60
EQSGLRLRDQ ESSTAYSMGQ SLHKVRAMEV QNAQEQCISS ESGLDENYGE SVENQMKPVI  120
LFSNPEYMFN PPQVDSSHLM ARVPYPYPYV DPSYGGLFCN AYGQMASNLH DSDQTQAQVN  180
SNVVGSTPAR VPLPHGLAED GLIYVNAKQY HGIIRRRKSR AKLEAQNKVI RNRKPYLHES  240
RHRHAVNRVR GSGGRFLSAK KDQPPNHITP PPTDWCQRKD TPDFNTCSSE TGDPGTMTAT  300
CSETTSISSG SVMFGRTWSD SQFSAVSSSG GFVHDGARNH ASVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.13e-35NF-YA family protein