PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022965397.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARF

Protein Properties

Length: 922aa MW: 102677 Da PI: 6.6272

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022965397.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	48.8	1.3e-15	6	68	34	98
SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 34 ktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ++l+ +d++ +sW++++iyr++++r++lt+GW+ Fv+ +++ +gD+v+F + +++ +l+++++ XP_022965397.1 6 QELVARDLHDNSWTFRHIYRGQPKRHLLTTGWSVFVSTKRVFAGDSVLFIR--DEKSQLLLGIRH 68 48999*********************************************4..466667888875 PP
2	Auxin_resp	124.6	6.8e-41	94	176	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPras+seFv++++k+ ka++++vs+GmRf+m+fete+s rr++Gt++g+sd+d+vrW+nS+Wr+L+ XP_022965397.1 94 AAHAAANNSPFTIFYNPRASPSEFVIPLAKYTKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDMDSVRWKNSQWRNLQ 176 79*******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 922 aa Download sequence
MQPPAQELVA RDLHDNSWTF RHIYRGQPKR HLLTTGWSVF VSTKRVFAGD SVLFIRDEKS 60 QLLLGIRHAN RQQPALSSSV ISSDSMHIGI LASAAHAAAN NSPFTIFYNP RASPSEFVIP 120 LAKYTKAMYT QVSLGMRFRM MFETEESGVR RYMGTITGIS DMDSVRWKNS QWRNLQVGWD 180 ESAAGERPNR VSIWEVEPVV TPFYICPPPF FRPKFPKQPG MPDDESDIEN AFKRAMPWFG 240 DDFGMKDTPS SIFPGLSLVQ WMSMQHNNQF PAAQSGILPS MVAPSALHGT LANDDPSKLL 300 CFQAPVMSSS NLQFSKENQQ NQVGQLPATS WSQQQQLQQL PPQQELRQQQ QQPKQSQQQQ 360 TSQSALPNNG VGGANHLSNQ SLQQPLVYSQ LQQQQQQLLA GNVQSHQTSQ PSNKNSIETT 420 SLLQETQFQP QIDQQPSLVS KHHQQTQFQQ APLQLLQQSL SQRTQQQPQV QQFSQPIIPS 480 EQQLQWQLLQ KLQQQQQQQP LVSPASPLFP PQMIQPHPMH QQNQPLPPLP LSNQPQFNTS 540 GGSFQTEKHN SNGFSSLGLM QSQQVPITQS HNQFKPTTAI RGYSGLTDGD APSCSTSPST 600 NNCQVSVSNL LNKNQQGAAT LGGDLVVEPA TNLPQELPSK PDLRNKPKFP NSKGLDQLKY 660 RSTVPDQLEA SSSGTSYCLD AGTIQQTFPL PTCLDNDVQS HPQTNIPFSN SIDGWAPDTL 720 LSRGYDSQKD LQNLLSNYEG GVPRDIETEL STAAIRSQSF GVPNLPFKPG CSNDVNVNEA 780 GALSSGLWAN HSQRMRTYTK VQKRGSVGRC IDVTRYKGYD ELRHDLARMF GIEGQLEDPQ 840 RTDWKLVYVD HENDILLVGD DPWEEFVSCV QSIKILSSSE VQQMSLNGNL GHIQAPNQAC 900 SGTDSGNAWR GQYDDNSAAS FN

Sequence ? help Back to Top

Protein Sequence Length: 922 aa Download sequence

MQPPAQELVA RDLHDNSWTF RHIYRGQPKR HLLTTGWSVF VSTKRVFAGD SVLFIRDEKS  60
QLLLGIRHAN RQQPALSSSV ISSDSMHIGI LASAAHAAAN NSPFTIFYNP RASPSEFVIP  120
LAKYTKAMYT QVSLGMRFRM MFETEESGVR RYMGTITGIS DMDSVRWKNS QWRNLQVGWD  180
ESAAGERPNR VSIWEVEPVV TPFYICPPPF FRPKFPKQPG MPDDESDIEN AFKRAMPWFG  240
DDFGMKDTPS SIFPGLSLVQ WMSMQHNNQF PAAQSGILPS MVAPSALHGT LANDDPSKLL  300
CFQAPVMSSS NLQFSKENQQ NQVGQLPATS WSQQQQLQQL PPQQELRQQQ QQPKQSQQQQ  360
TSQSALPNNG VGGANHLSNQ SLQQPLVYSQ LQQQQQQLLA GNVQSHQTSQ PSNKNSIETT  420
SLLQETQFQP QIDQQPSLVS KHHQQTQFQQ APLQLLQQSL SQRTQQQPQV QQFSQPIIPS  480
EQQLQWQLLQ KLQQQQQQQP LVSPASPLFP PQMIQPHPMH QQNQPLPPLP LSNQPQFNTS  540
GGSFQTEKHN SNGFSSLGLM QSQQVPITQS HNQFKPTTAI RGYSGLTDGD APSCSTSPST  600
NNCQVSVSNL LNKNQQGAAT LGGDLVVEPA TNLPQELPSK PDLRNKPKFP NSKGLDQLKY  660
RSTVPDQLEA SSSGTSYCLD AGTIQQTFPL PTCLDNDVQS HPQTNIPFSN SIDGWAPDTL  720
LSRGYDSQKD LQNLLSNYEG GVPRDIETEL STAAIRSQSF GVPNLPFKPG CSNDVNVNEA  780
GALSSGLWAN HSQRMRTYTK VQKRGSVGRC IDVTRYKGYD ELRHDLARMF GIEGQLEDPQ  840
RTDWKLVYVD HENDILLVGD DPWEEFVSCV QSIKILSSSE VQQMSLNGNL GHIQAPNQAC  900
SGTDSGNAWR GQYDDNSAAS FN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	1e-154	ARF family protein