PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022965375.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 448aa MW: 49215.1 Da PI: 7.3008

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022965375.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.9	7.3e-13	271	316	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr+++P+ K++Ka+ L A+ YI++L XP_022965375.1 271 NHVEAERQRRQKLNHRFYALRSVVPNV-----SKMDKASLLADAIVYINEL 316 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MDDFSISSSS SPNSSAHTIQ QRLQFILHNL PQWFAYSIFW LASKDSASNL IFSWSDGYFR 60 GTRSGGGGGS QLISFGFDEV AVDRAEAGDF SDLEGYYTVS ISQMYGGVDN VVGQVFDSSA 120 YIWLTIDESL HLYECDRVKE ARLRGIQTLV FVSTSDGVLE LGSSELIKED WSLAHFAKSL 180 FGTFSASSTQ FKQKDHVGVG GGGIIQLQAP PCSGIVKREM NGGRGGGGSS SDSLSDNSDG 240 NFLSTVDNNN VGNKKGKRQA KNKVESTMPV NHVEAERQRR QKLNHRFYAL RSVVPNVSKM 300 DKASLLADAI VYINELKAKV QKMESKLKQS QHQASSSLSN AFDQKWSGIS TIEQTVSSTS 360 YAMNNGYNNN TVEVQLVGAE AIVRVHCRDE NYPSARLMNV LKDLGLQVRQ ASLSSVNDLM 420 LQDVVIRVPQ GVTLREKTLR TAILQRLE

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MDDFSISSSS SPNSSAHTIQ QRLQFILHNL PQWFAYSIFW LASKDSASNL IFSWSDGYFR  60
GTRSGGGGGS QLISFGFDEV AVDRAEAGDF SDLEGYYTVS ISQMYGGVDN VVGQVFDSSA  120
YIWLTIDESL HLYECDRVKE ARLRGIQTLV FVSTSDGVLE LGSSELIKED WSLAHFAKSL  180
FGTFSASSTQ FKQKDHVGVG GGGIIQLQAP PCSGIVKREM NGGRGGGGSS SDSLSDNSDG  240
NFLSTVDNNN VGNKKGKRQA KNKVESTMPV NHVEAERQRR QKLNHRFYAL RSVVPNVSKM  300
DKASLLADAI VYINELKAKV QKMESKLKQS QHQASSSLSN AFDQKWSGIS TIEQTVSSTS  360
YAMNNGYNNN TVEVQLVGAE AIVRVHCRDE NYPSARLMNV LKDLGLQVRQ ASLSSVNDLM  420
LQDVVIRVPQ GVTLREKTLR TAILQRLE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	222	228	GGRGGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G46760.1	2e-40	bHLH family protein