PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022965314.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 731aa MW: 80658.8 Da PI: 4.8102

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022965314.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.3	0.00031	550	587	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R++i +++ eLr ++P+ a K s + L ++++Y+ Lq XP_022965314.1 550 RQQIQDRLKELRGIIPSgA------KCSIDSLLDRTIKYMLFLQ 587 89*************77......7777779******9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 731 aa Download sequence
MAFFGALIEE TPCCVVGVYA YRVLTLEDIW YEEQVGLVAA NMLQQVHMLG EGAIGTAAFT 60 GKHRWMFSDA SFGELHSSMF EDNLEFQQQF SCGIKTVAVI PVHPHGVIQL GSTHKIWESF 120 EFLADAKRSL CQVINGGRRV QEKTMPMSSS ADIFHFNELF TSFIMSSNSD DWSLGAVHNN 180 SRTDFAGKSY ASIDKQPAVL ASSEPMPTSN IREQDAQYPS YSDADMLDSC RNLVEYGHHS 240 LRIATVSSGT GSLCMDNVQQ SARFPVIEGE LVESMTSRPD FCDEHLSEDF TMDLPDISLI 300 DDLFQWFDSS PENGTNGATT AVNDNLPQST GISTLSSNLV EACKFVDGSS KTSVVSARSC 360 ITNASQSSEQ DNRIITQGAK DRLFDSLGLG TEAHESYSGG CNSMSTCSSK LAIGSTDLPR 420 KRLFWELGIE ELLDGRSNTS STTKSSVENH QSIASRRSKM ERSLFETNPI QLLDPCTNVN 480 PTQSSGTADH FPCKKEATLK SPVSSWIDDS YSTNIGGSIL ELSRKSEEPV KTCKKRARPG 540 ESNRPRPKDR QQIQDRLKEL RGIIPSGAKC SIDSLLDRTI KYMLFLQSVT KYADKLKETH 600 EPKLIDQDDG VAVNDKCTTE RGGGGVTWAY KVGTTPIVCP VIVEDLSSPG QMLIEMLCEE 660 RGFFLEIADM IRGYGLTILK GMMEVREDKI WAQFVVEVKL NTNQSITRIN VFLSLMELLQ 720 QTNISGAELA S

Sequence ? help Back to Top

Protein Sequence Length: 731 aa Download sequence

MAFFGALIEE TPCCVVGVYA YRVLTLEDIW YEEQVGLVAA NMLQQVHMLG EGAIGTAAFT  60
GKHRWMFSDA SFGELHSSMF EDNLEFQQQF SCGIKTVAVI PVHPHGVIQL GSTHKIWESF  120
EFLADAKRSL CQVINGGRRV QEKTMPMSSS ADIFHFNELF TSFIMSSNSD DWSLGAVHNN  180
SRTDFAGKSY ASIDKQPAVL ASSEPMPTSN IREQDAQYPS YSDADMLDSC RNLVEYGHHS  240
LRIATVSSGT GSLCMDNVQQ SARFPVIEGE LVESMTSRPD FCDEHLSEDF TMDLPDISLI  300
DDLFQWFDSS PENGTNGATT AVNDNLPQST GISTLSSNLV EACKFVDGSS KTSVVSARSC  360
ITNASQSSEQ DNRIITQGAK DRLFDSLGLG TEAHESYSGG CNSMSTCSSK LAIGSTDLPR  420
KRLFWELGIE ELLDGRSNTS STTKSSVENH QSIASRRSKM ERSLFETNPI QLLDPCTNVN  480
PTQSSGTADH FPCKKEATLK SPVSSWIDDS YSTNIGGSIL ELSRKSEEPV KTCKKRARPG  540
ESNRPRPKDR QQIQDRLKEL RGIIPSGAKC SIDSLLDRTI KYMLFLQSVT KYADKLKETH  600
EPKLIDQDDG VAVNDKCTTE RGGGGVTWAY KVGTTPIVCP VIVEDLSSPG QMLIEMLCEE  660
RGFFLEIADM IRGYGLTILK GMMEVREDKI WAQFVVEVKL NTNQSITRIN VFLSLMELLQ  720
QTNISGAELA S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	2e-48	bHLH family protein