PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022965098.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 334aa    MW: 35949.8 Da    PI: 7.3701
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022965098.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.92.3e-1399143347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ Iar     Rt+ q+ s+ qky
   XP_022965098.1  99 PWTEEEHRMFLMGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKY 143
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MTRRCSHCSH NGHNSRTCPN RGVKLFGVRL TDGSIRKSAS MGNLSHYAGS GSGALQGGSN  60
NPASPGETPE HGVAADGYAS EDFVPGSSSS CRERKKGVPW TEEEHRMFLM GLQKLGKGDW  120
RGIARNYVVS RTPTQVASHA QKYFIRQTNV SRRKRRSSLF DIVAGEHVEN SIVQQDFLSV  180
NNSHAESQSN NPLPTPPTVD EECESMDSTN SNDGEPAPAE PEDPQCCYPV VYPAYVTPFF  240
PFSIPFYSGY SAESNNKETH EVLKPTAVHL KSPLNVDELV GMSKLSLGES IGHAGPSSLS  300
LKLLQGSSRR SAFHANPASG SENMSSGGSP IPAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-124MYB_related family protein