PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022964427.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 552aa MW: 62037.6 Da PI: 6.6332

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022964427.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	69.9	4e-22	203	256	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++Wt L +F++av+ + G ++A+Pk+ile+m+v+gLt+e+v+SHLQkYR+ XP_022964427.1 203 KAKVVWTDFLQYKFLHAVHFI-GLDRAVPKKILEVMNVPGLTRENVASHLQKYRI 256 6799***************.******************************6 PP
2	Myb_DNA-binding	24.9	4.8e-08	206	255	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT ++ ++++av+ G + +k+I + m+ g+t++++ s++qky+ XP_022964427.1 206 VVWTDFLQYKFLHAVHFIGLDraVPKKILEVMNvPGLTRENVASHLQKYR 255 67***********************************************7 PP
3	Response_reg	71.9	2.6e-24	20	128	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 v+++dD+ + + ++ ++l+ +y ev ++ d+ al +l+ + +Dlil+ + mp+mdG+el+++ +ee k+p+i++++ + e+ +++a++ G XP_022964427.1 20 VMVIDDDATSLAIVSSLLRALNY-EVSSFYDPIRALYTLRVGKqsFDLILTALYMPKMDGFELTRRVNEEF-KIPVIMISTDDRENVMVRAIEEG 112 89*******************.***********777777******************9999.******************* PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 + +l Kpf+ ++l++ XP_022964427.1 113 VVLYLLKPFSSNDLRN 128 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MDHQQVEDSN IIVPPVRVHV MVIDDDATSL AIVSSLLRAL NYEVSSFYDP IRALYTLRVG 60 KQSFDLILTA LYMPKMDGFE LTRRVNEEFK IPVIMISTDD RENVMVRAIE EGVVLYLLKP 120 FSSNDLRNIW QFAISTKSRS IPNSDLYTPE TGSHGVRFRP IESQPVSSSK GVVSGRKKKD 180 SKGKNGNQEK VIDKKESNPM KKKAKVVWTD FLQYKFLHAV HFIGLDRAVP KKILEVMNVP 240 GLTRENVASH LQKYRIFLRK VAERCMISSD KTTEEIIWSK FLSRHASFVL EKIQQKRSFN 300 LNASQNPNFP PFPNRDQCSN PNNGDRCRFT NGQLSFAKKL PLYNIGHTAS FTNNVDPLPM 360 NVDNNAQAFN FSGSQFQNST PFQDPYLGSS FSSNNIYHGG SSVGLNGEIL TTQNSVSNGN 420 YVGFDGNYVG FGFGGDHNSY DWGLMCNNNE TNFGGASQGT MSHSNHALDN KVSGQEDNGF 480 LPSLYPSESI VHNQIPNQQQ DSVGFMKDQS QQLNNMYITD DESSTFDPLS IDDQVLDEFL 540 GWLLVNDTLA HV

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MDHQQVEDSN IIVPPVRVHV MVIDDDATSL AIVSSLLRAL NYEVSSFYDP IRALYTLRVG  60
KQSFDLILTA LYMPKMDGFE LTRRVNEEFK IPVIMISTDD RENVMVRAIE EGVVLYLLKP  120
FSSNDLRNIW QFAISTKSRS IPNSDLYTPE TGSHGVRFRP IESQPVSSSK GVVSGRKKKD  180
SKGKNGNQEK VIDKKESNPM KKKAKVVWTD FLQYKFLHAV HFIGLDRAVP KKILEVMNVP  240
GLTRENVASH LQKYRIFLRK VAERCMISSD KTTEEIIWSK FLSRHASFVL EKIQQKRSFN  300
LNASQNPNFP PFPNRDQCSN PNNGDRCRFT NGQLSFAKKL PLYNIGHTAS FTNNVDPLPM  360
NVDNNAQAFN FSGSQFQNST PFQDPYLGSS FSSNNIYHGG SSVGLNGEIL TTQNSVSNGN  420
YVGFDGNYVG FGFGGDHNSY DWGLMCNNNE TNFGGASQGT MSHSNHALDN KVSGQEDNGF  480
LPSLYPSESI VHNQIPNQQQ DSVGFMKDQS QQLNNMYITD DESSTFDPLS IDDQVLDEFL  540
GWLLVNDTLA HV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	176	205	RKKKDSKGKNGNQEKVIDKKESNPMKKKAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.1	1e-49	ARR-B family protein