PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022964394.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 340aa    MW: 37535.6 Da    PI: 7.3384
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022964394.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.45.3e-08252292954
                     HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      r+RR+ri +++  L++l+P  +      K++ a++L +A +Y+k L
  XP_022964394.1 252 ARQRRERISERIRVLQRLVPGgN------KMDTASMLDEAANYLKFL 292
                     69******************955......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MDYSNRDGYG SRVATTNMTS PVSFWSNYQQ GVEERFMISN SNSHFFNSVQ DLPISPPLTS  60
FATSKDMDAI ALYGFDDGKS TSVTPCSLKS LDCLLSATNS NTDTSVEDND GSVSMILTDY  120
TNLWNFGSNA ATTKRTHQES TEYSVFSNTI KNLSDSTSNS GGFRIITDQN QPKSKKPRSE  180
KPPSSSNINF QQSCSSGSSC IDQEPDPEAI AQMKEMIYRA AALRPVNLGV EGIEKPKRKN  240
VRISTDPQTV AARQRRERIS ERIRVLQRLV PGGNKMDTAS MLDEAANYLK FLKSQIKALE  300
NLGQKIESLN CPSTSLAFSF NPSFPIQSSS SLSHNQYPQN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1253258RQRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21330.12e-60bHLH family protein