PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022963777.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 372aa    MW: 40166.2 Da    PI: 7.4825
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022963777.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2651.5e-20184233255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa+a+++a+++++g
  XP_022963777.1 184 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 233
                     7********.**********7.....337*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    
MCLLKVANRR GIGGDLGPFP SGGGDGDGDN GKKLFYSQQN DGDYYSAVGE VSAMVSVLTD  60
VVSGVGAADS NYSGGQVFSS SSSTSTSSPL SSFSSEPSYV SAMSSWVGQK RLRERENAET  120
ERNFDSLSRV FSGFNGQSSS AVITAVKEEI PIPYTGISNP GTAVAASPMS ETAAATAVSD  180
RRRRYRGVRQ RPWGKWAAEI RDPHKAARVW LGTFDTAEAA ARAYDEAALR FRGNKAKLNF  240
PENVGLLPPQ QQHIPISSPQ FVPPRTAALQ IQTYRDYVEY SNFLQSSGDF LGQPSSLLQQ  300
MYYNAQLTPF QYLPAPAPSL SSVSNSVFIP PQQQQQQQMG LFRPPRSQNQ NQDGSDYFPG  360
TSWNDSGGPS SG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1180185DRRRRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43160.12e-17ERF family protein