PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022963757.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 301aa MW: 34385 Da PI: 7.9952

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022963757.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44	3.9e-14	100	151	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ Ave++k+L+ XP_022963757.1 100 QRMTHIAVERNRRKQMNEHLSVLRSLMPES---YVQRGDQASIVGGAVEFVKELE 151 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MSLDALSSND FFNFIIYDTI SAIPNTSPVL HDSSENTFFS DDTCSRHQDH QHGLEGSLKP 60 DRKRRPSELE SLRTASTRQG KKKRKRKPRV CKNKEEAETQ RMTHIAVERN RRKQMNEHLS 120 VLRSLMPESY VQRGDQASIV GGAVEFVKEL EHLLSTLEAK KLQVLQKEVD HQEQEINDNK 180 LFSFGSLLMN NSDHNYCSQY STKYTSKSKA SSADIEVTMI ETHANLRILS TRSHRQLLKL 240 IAGLQALRLT ILHLSLTDFH PLVLYSISLK VEEGCQLRSV DDIAAAAHHM VRIIEEETML 300 C

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	61	66	DRKRRP
2	62	84	RKRRPSELESLRTASTRQGKKKR
3	63	85	RKRRPSELESLRTASTRQGKKKR
4	81	87	KKKRKRK
5	82	87	KKRKRK
6	101	112	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22490.1	1e-62	bHLH family protein