PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022963628.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CAMTA

Protein Properties

Length: 1089aa MW: 121381 Da PI: 5.9281

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022963628.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	182.5	4.8e-57	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 ++ k+rwl++ ei++iL n+ k+++++e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktvrE+hekLKvg+++vl+cyYah+een++fqr XP_022963628.1 20 IEAKHRWLRPAEICEILRNYPKFQIASEPPDRPSSGSLFLFDRKVLRYFRKDGHKWRKKKDGKTVREAHEKLKVGSIDVLHCYYAHGEENENFQR 114 4569***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Lee+l +iv+vhylevk XP_022963628.1 115 RSYWMLEEHLMHIVFVHYLEVK 136 *****************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1089 aa Download sequence
MADRGSYGLA PRLDIDQLLI EAKHRWLRPA EICEILRNYP KFQIASEPPD RPSSGSLFLF 60 DRKVLRYFRK DGHKWRKKKD GKTVREAHEK LKVGSIDVLH CYYAHGEENE NFQRRSYWML 120 EEHLMHIVFV HYLEVKGNRT NIGAVVETDE VSSSSQKSSP TSASYSSSYN QAASENADSP 180 SPTSPLTPFC EDCDTEDTGQ ATSRFRSFPT SPKMGNGLLM NKQDAGQSNF YFPHSSSNTS 240 VPAVDYVSQV QKDVLGGNIC GTNVTDSQKT LSSASWEEIL QHCTTGFQAV PSHVLSSLIE 300 PVSSGIVVGQ ENSIPGKPST SNSAITEDFG SSLTMNPNWQ VSFEDNTSSF SKEYVDQFPE 360 LYSVYDIDSR LTEQKSHNAT FGSGHEMSCA HPGIENEEIL PNNLELQFKE GESYSAMRLS 420 SENDTSKEGT VGYSLSLKQS LIDGEESLKK VDSFSRWVSR ELVEVDDLHM HPSSGLSWST 480 VECGDMVDNS SLSPSLSEDQ LFSIIEFSPK WTLADLETEV VIIGKFLGNN HGTKCYWSCM 540 FGEVEVPAEV LADGILCCHA PPHSVGQVPF YVTCSNRLAC SEIREFDYLA GSAQDVDVTE 600 VYTAGATEEL YLHMRLERLL SHRSSNPPNN LSEGALEKRN LIRELISIKE EEDCYGEEPN 660 SLNVQIQHQN KEFLFVKLMK EKVYSWLIRK VIEGGKGPHI LDDEGQGLIH LAAALGYDWA 720 IRPIVAAGVS INFRDINGWT ALHWAAFCGR ELTVGTLITL NAAPGLLADP SPENPLGIPP 780 SELASMNGHK GIAGFLAESS LTSYIESISM GETVKDGVLD VSKRKPVHTV SERRATPISD 840 GFMPADLSLK DSLTAVCNAT QAAGRIHLMF RMQSFQRKKL SECSPDELGS SDDTAISFAK 900 ARARKSGLSN SPAHAAAVHI QKKFRGWRMR KEFLLIRQRI VKIQAHVRGH QVRKQYKKIV 960 WSVGILDKII LRWRRKGSGL RGFRSDAAAK NPSAVLEPPK EDDYDFLAKG RRQTEERFQK 1020 ALTRVKSMAQ YPEGRDQYRR LLTVVQKCQE TKASNMAITS TREEIIEGDD MIDIDSLLDD 1080 DALMSMTFD

Sequence ? help Back to Top

Protein Sequence Length: 1089 aa Download sequence

MADRGSYGLA PRLDIDQLLI EAKHRWLRPA EICEILRNYP KFQIASEPPD RPSSGSLFLF  60
DRKVLRYFRK DGHKWRKKKD GKTVREAHEK LKVGSIDVLH CYYAHGEENE NFQRRSYWML  120
EEHLMHIVFV HYLEVKGNRT NIGAVVETDE VSSSSQKSSP TSASYSSSYN QAASENADSP  180
SPTSPLTPFC EDCDTEDTGQ ATSRFRSFPT SPKMGNGLLM NKQDAGQSNF YFPHSSSNTS  240
VPAVDYVSQV QKDVLGGNIC GTNVTDSQKT LSSASWEEIL QHCTTGFQAV PSHVLSSLIE  300
PVSSGIVVGQ ENSIPGKPST SNSAITEDFG SSLTMNPNWQ VSFEDNTSSF SKEYVDQFPE  360
LYSVYDIDSR LTEQKSHNAT FGSGHEMSCA HPGIENEEIL PNNLELQFKE GESYSAMRLS  420
SENDTSKEGT VGYSLSLKQS LIDGEESLKK VDSFSRWVSR ELVEVDDLHM HPSSGLSWST  480
VECGDMVDNS SLSPSLSEDQ LFSIIEFSPK WTLADLETEV VIIGKFLGNN HGTKCYWSCM  540
FGEVEVPAEV LADGILCCHA PPHSVGQVPF YVTCSNRLAC SEIREFDYLA GSAQDVDVTE  600
VYTAGATEEL YLHMRLERLL SHRSSNPPNN LSEGALEKRN LIRELISIKE EEDCYGEEPN  660
SLNVQIQHQN KEFLFVKLMK EKVYSWLIRK VIEGGKGPHI LDDEGQGLIH LAAALGYDWA  720
IRPIVAAGVS INFRDINGWT ALHWAAFCGR ELTVGTLITL NAAPGLLADP SPENPLGIPP  780
SELASMNGHK GIAGFLAESS LTSYIESISM GETVKDGVLD VSKRKPVHTV SERRATPISD  840
GFMPADLSLK DSLTAVCNAT QAAGRIHLMF RMQSFQRKKL SECSPDELGS SDDTAISFAK  900
ARARKSGLSN SPAHAAAVHI QKKFRGWRMR KEFLLIRQRI VKIQAHVRGH QVRKQYKKIV  960
WSVGILDKII LRWRRKGSGL RGFRSDAAAK NPSAVLEPPK EDDYDFLAKG RRQTEERFQK  1020
ALTRVKSMAQ YPEGRDQYRR LLTVVQKCQE TKASNMAITS TREEIIEGDD MIDIDSLLDD  1080
DALMSMTFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein