PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022963596.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 388aa MW: 43636.4 Da PI: 5.4399

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022963596.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.4	3.2e-33	192	245	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 r+rWtpeLH++Fveav++LGGse+AtPk +l+lm+v+gLt++hvkSHLQkYR+ XP_022963596.1 192 LRMRWTPELHDAFVEAVNKLGGSERATPKGVLKLMQVEGLTIYHVKSHLQKYRT 245 69***************************************************8 PP
2	Myb_DNA-binding	56.1	8.7e-18	193	244	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++ +v+av++lGg t+k + + m+ +g+t +++ks++qky+ XP_022963596.1 193 RMRWTPELHDAFVEAVNKLGGSeraTPKGVLKLMQvEGLTIYHVKSHLQKYR 244 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MERELVSRRF VHSSHLHSSS GVVGHIFSSS PGFSTDLHYS SVSFYEHQSD APFVPEPSAN 60 GVLLNSHSEL LSSKNHPTGE NGNSWRSDAL PGFREAPESN PVGGSRVENN SCSSLMVSED 120 FSKENDCQEW TDRLITDDPL SSNWSDLLVD ADVVDLEPKM VHQAPNPAIQ MHVQQSRVQN 180 RLPSSNGAPS KLRMRWTPEL HDAFVEAVNK LGGSERATPK GVLKLMQVEG LTIYHVKSHL 240 QKYRTARYQP ESSKGPMEKS TTSLDDISSL DLKTSIDITE ALRLQMEVQK KLHEQLEIQR 300 NLQLRIEEQG KYLQMMFEEQ CKSSNNLTKP SDNPTRFTDP SEADSISEKT TNQVEGKLLA 360 SHREVPENPE PDVFESRSEL SKRQRTDE

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MERELVSRRF VHSSHLHSSS GVVGHIFSSS PGFSTDLHYS SVSFYEHQSD APFVPEPSAN  60
GVLLNSHSEL LSSKNHPTGE NGNSWRSDAL PGFREAPESN PVGGSRVENN SCSSLMVSED  120
FSKENDCQEW TDRLITDDPL SSNWSDLLVD ADVVDLEPKM VHQAPNPAIQ MHVQQSRVQN  180
RLPSSNGAPS KLRMRWTPEL HDAFVEAVNK LGGSERATPK GVLKLMQVEG LTIYHVKSHL  240
QKYRTARYQP ESSKGPMEKS TTSLDDISSL DLKTSIDITE ALRLQMEVQK KLHEQLEIQR  300
NLQLRIEEQG KYLQMMFEEQ CKSSNNLTKP SDNPTRFTDP SEADSISEKT TNQVEGKLLA  360
SHREVPENPE PDVFESRSEL SKRQRTDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	3e-75	G2-like family protein