PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022963556.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 307aa    MW: 34686.9 Da    PI: 7.1512
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022963556.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.75.6e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l+d v++ G g+W+  ++  g++R++k+c++rw +yl
   XP_022963556.1 14 KGPWTPEEDKKLIDFVARNGHGSWRNLPKLAGLNRCGKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding55.21.6e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++++eE+  +++++  lG++ W++Ia++++ gRt++++k++w+++l
   XP_022963556.1  67 RGKFSEEEESAIIKLHSVLGNR-WSKIASHFP-GRTDNEIKNFWNTHL 112
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MGRSPCCDEI GVKKGPWTPE EDKKLIDFVA RNGHGSWRNL PKLAGLNRCG KSCRLRWTNY  60
LRPDIKRGKF SEEEESAIIK LHSVLGNRWS KIASHFPGRT DNEIKNFWNT HLRKKLLQMG  120
IDPNTHKPRT DLNHLLNNSQ LFNGIANYLN NDHLMLQAEL VKLQLLQNLC QLLNPTTPSQ  180
ALPGTPLDRL QNPNSNPSRA SFSTQNPNSS QLQAGFTSGF MSGSGFEYED KNKAKMEEME  240
NLDYVQVENY YPILPPLTSE SETNPLGCST NSNSPSSSSS IFDSLESLMN EDEPSESYWN  300
NLLRSTI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34670.18e-81MYB family protein