PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022963221.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TALE

Protein Properties

Length: 695aa MW: 76136.5 Da PI: 7.1085

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022963221.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.4	5.6e-09	500	537	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + XP_022963221.1 500 FEHflHPYPSDADKLLLARQTGLSRNQVSNWFINARVR 537 664559******************************88 PP
2	BELL	115.5	2.7e-37	360	431	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +r e+q++k+kLls+l+eV++rY+ y+eq+q+v++sF+ v+g g+a+pYt+l +ka+SrhFrcLkdai+eq+ XP_022963221.1 360 DRIEHQRRKVKLLSMLDEVERRYNLYREQMQMVVNSFDLVMGFGAAAPYTTLTQKAMSRHFRCLKDAITEQL 431 589*******************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 695 aa Download sequence
MGIAKGPLIL SNKPTNCANS SMSHDYHPHQ GILAFSNPLD KSNSPSLPHQ IRRDKLRVDS 60 FSADPLPPPP PTVAGIDEHL HHHHHHHQQH LHHVYATSPT EGTMLSDMFN YPPTPSAAPA 120 SVEFSDNFRT LRQPNSASAM QLFLMNPPPP PPPPPRSPSP PSTSSTLHML LPNLPSGSLQ 180 GFESGGVGDQ TGFGQFAVAE NQGLSLSLHS SSLQHLEDVG AGAKADELRI RDGGMLYNYN 240 NNNNQVHGGG GNGSNSSILQ YSFRNNSENS PHSFQMNPNH QVQIGFGSSL GVVNLLRNSK 300 YVKAAQELLE EFCSVGRVQL KKNKSNMKQN HNNPDTAAGG GGGGASSSST KDHPPLSAPD 360 RIEHQRRKVK LLSMLDEVER RYNLYREQMQ MVVNSFDLVM GFGAAAPYTT LTQKAMSRHF 420 RCLKDAITEQ LKQSYEALGE KGGNGGSGIT KGETPRLKLL EQSLRQQRAF HQMGMMEQEA 480 WRPQRGLPER SVNILRAWLF EHFLHPYPSD ADKLLLARQT GLSRNQVSNW FINARVRLWK 540 PMVEEMYQIE GKDETDHSHQ QQPSKDDDDD TTDNKIQNSA INAQNPTPTT ATTSSIPPPS 600 TTIAEEGAAG FTATHDQFSE LHDVWRHGSG QHYGTMSEDA RAATDVSNGP TLIRFGTSGT 660 TTGDVSLTLG LRHAGNTSAA TMDNPSFSLR DFGHS

Sequence ? help Back to Top

Protein Sequence Length: 695 aa Download sequence

MGIAKGPLIL SNKPTNCANS SMSHDYHPHQ GILAFSNPLD KSNSPSLPHQ IRRDKLRVDS  60
FSADPLPPPP PTVAGIDEHL HHHHHHHQQH LHHVYATSPT EGTMLSDMFN YPPTPSAAPA  120
SVEFSDNFRT LRQPNSASAM QLFLMNPPPP PPPPPRSPSP PSTSSTLHML LPNLPSGSLQ  180
GFESGGVGDQ TGFGQFAVAE NQGLSLSLHS SSLQHLEDVG AGAKADELRI RDGGMLYNYN  240
NNNNQVHGGG GNGSNSSILQ YSFRNNSENS PHSFQMNPNH QVQIGFGSSL GVVNLLRNSK  300
YVKAAQELLE EFCSVGRVQL KKNKSNMKQN HNNPDTAAGG GGGGASSSST KDHPPLSAPD  360
RIEHQRRKVK LLSMLDEVER RYNLYREQMQ MVVNSFDLVM GFGAAAPYTT LTQKAMSRHF  420
RCLKDAITEQ LKQSYEALGE KGGNGGSGIT KGETPRLKLL EQSLRQQRAF HQMGMMEQEA  480
WRPQRGLPER SVNILRAWLF EHFLHPYPSD ADKLLLARQT GLSRNQVSNW FINARVRLWK  540
PMVEEMYQIE GKDETDHSHQ QQPSKDDDDD TTDNKIQNSA INAQNPTPTT ATTSSIPPPS  600
TTIAEEGAAG FTATHDQFSE LHDVWRHGSG QHYGTMSEDA RAATDVSNGP TLIRFGTSGT  660
TTGDVSLTLG LRHAGNTSAA TMDNPSFSLR DFGHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-125	TALE family protein