PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022962177.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family SRS
Protein Properties Length: 337aa    MW: 36308.2 Da    PI: 6.8477
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022962177.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702227.23.1e-701032593153
          DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa..aeaaskrkrel......kskkqsalsst 89 
                      g+++CqdCGnqakkdCa+ RCRtCCksrgf+C+thvkstWvpaakrrerqqq aa+++++++++    ++skr+re+      +++++sa+++ 
  XP_022962177.1 103 GGGMNCQDCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQIAALQQQQQQEQfrGGENSKRQRETqittavSAATASATACP 197
                     5789*****************************************************99999988665566666666543433333344444444 PP

          DUF702  90 klssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153
                     +l+s +  + le +++P+ev+s+avfrcv+vs++dd++ee+aYqtav+igGhvfkGiLydqG+e
  XP_022962177.1 198 RLPSIT--SGLELAQFPSEVNSPAVFRCVKVSAMDDADEEFAYQTAVNIGGHVFKGILYDQGPE 259
                     444444..3467777***********************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MAGFFYLGGG REGPPNKQEE EEEREQNLFM YRNEEIYNKG FEIWPQQYTN HHQNPSLTDH  60
LSFGVGPSRR SFMINDSDEP SRSAFTVMRP AAAFAASAAA AAGGGMNCQD CGNQAKKDCA  120
YLRCRTCCKS RGFQCQTHVK STWVPAAKRR ERQQQIAALQ QQQQQEQFRG GENSKRQRET  180
QITTAVSAAT ASATACPRLP SITSGLELAQ FPSEVNSPAV FRCVKVSAMD DADEEFAYQT  240
AVNIGGHVFK GILYDQGPEV RYTAAGESSS GHGGDGSTHP LNLIAGSSNP GPTSASTSAA  300
TSTNPSAAAA PLLDPTIYPA PLNAFMAGTQ FFPPSRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75520.11e-70SRS family protein