PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022962012.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TALE

Protein Properties

Length: 474aa MW: 53413.1 Da PI: 6.4302

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022962012.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.1	1.4e-08	417	455	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e+ LA k gLt +qV++WF N R + XP_022962012.1 417 MFQNflHPYPKDTEKHLLAVKSGLTRNQVSNWFINARVR 455 6887779******************************88 PP
2	BELL	63.5	4.4e-21	293	356	6	70
BELL 6 qkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiae 70 +kk++Ll+ll+ +d+rY+q+ ++++tv s+F+a+++l++ +++t+ l++i+ +++L+++i++ XP_022962012.1 293 DAKKSHLLTLLQLIDERYSQCLDEIHTVTSAFHAATDLDP-RLHTRYTLQTITSVYKNLREKITD 356 58************************************.********************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MSTALQQIDL GDACSSPSGN VEFHNQLAGA IPVTCFQSTS LTPLNVICEN TKDSAFPDRH 60 FQPLETFRTC IIPSTSNALN SSFASSLICE GDESLCNLNN KWESQRFNCI QQLARENPER 120 SDFQTISSME NLNQNGWMPS NTMNSKLWNE LSLSLATSNP VLSGGTNFLD QYSQLTFSGA 180 TQPCLNSTEL ASNLNSCNFR DLSLSYRCGS PVHLSQAIAG SRYLSVIQDV LSQIASYPLE 240 SSEQDRHLTS TVGFVPFSSS SLDDNTVEFG SDVTGRCSSQ IQMEIQWQKL SGDAKKSHLL 300 TLLQLIDERY SQCLDEIHTV TSAFHAATDL DPRLHTRYTL QTITSVYKNL REKITDCIIA 360 VGMHSDTMCT KENEKTFEAS FIQKQWALQQ LKRKDSQLWR PQRGLPEKSV SVLRAWMFQN 420 FLHPYPKDTE KHLLAVKSGL TRNQVSNWFI NARVRLWKPM IEEMYAEMSR RKSS

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MSTALQQIDL GDACSSPSGN VEFHNQLAGA IPVTCFQSTS LTPLNVICEN TKDSAFPDRH  60
FQPLETFRTC IIPSTSNALN SSFASSLICE GDESLCNLNN KWESQRFNCI QQLARENPER  120
SDFQTISSME NLNQNGWMPS NTMNSKLWNE LSLSLATSNP VLSGGTNFLD QYSQLTFSGA  180
TQPCLNSTEL ASNLNSCNFR DLSLSYRCGS PVHLSQAIAG SRYLSVIQDV LSQIASYPLE  240
SSEQDRHLTS TVGFVPFSSS SLDDNTVEFG SDVTGRCSSQ IQMEIQWQKL SGDAKKSHLL  300
TLLQLIDERY SQCLDEIHTV TSAFHAATDL DPRLHTRYTL QTITSVYKNL REKITDCIIA  360
VGMHSDTMCT KENEKTFEAS FIQKQWALQQ LKRKDSQLWR PQRGLPEKSV SVLRAWMFQN  420
FLHPYPKDTE KHLLAVKSGL TRNQVSNWFI NARVRLWKPM IEEMYAEMSR RKSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	1e-101	TALE family protein