PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022961688.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 342aa    MW: 38023.5 Da    PI: 6.6374
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022961688.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.71.3e-17233267135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  XP_022961688.1 233 CMHCATNKTPQWRTGPMGPKTLCNACGVRYKSGRL 267
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MEPPEFVHLK AYTSTHSSSD QHRTAAAEHD LFFVENLLDF SNHADADADA DHADAGLLSD  60
NSNNNHHNIN TPSCFHDNGN SAQLTSFLDH VNLPDAHFSA ELAIPYDELL ELEWLSNFVE  120
ECEYIQNLEL ITGVKVKPHE PTAVSTRNAA AIFNPDVVSV PAKARSKRSR AVVSNWNNSL  180
LLPLSPTTSS SESDINAEPP QLVKKAPPKA VVTAKKKDSP EGGVSPAGEE RRCMHCATNK  240
TPQWRTGPMG PKTLCNACGV RYKSGRLVPE YRPAASPTFV LTRHSNSHRK VMELRRQKEI  300
LRGQQQPQQL ILDHHRQDLI FDASSCDNYL IHHVGPDFRQ LI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.16e-76GATA family protein