PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022961366.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 362aa MW: 40271.8 Da PI: 8.4668

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022961366.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.9	1.1e-33	32	86	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_022961366.1 32 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 86 79****************************************************8 PP
2	Myb_DNA-binding	72.5	6.3e-23	34	85	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_022961366.1 34 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 85 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MFHPKKASSM NSHERGVCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP 60 KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSIK DGMRASGLEL HRNTISSSNM 120 INRTMNEMQM EVQRRLHEQL EVQRHLQLRI EAQGKYMQSI LEKACQTLAG EDMAASGGYK 180 LMPGIPSNNN QQGVGDMGGG IKDFGTPLGF PSFQDLNLYG GHQLDLQQNV DGFMPHNDSL 240 LCLGKKKPRP PANYGSGKYA LDWPDDLRLQ GIGMTPPQQA DHEFKDINIV ATLAERGHLE 300 EMYEAKPVGS DESMLGDHKK YDTNDNASLK LQRPSPRRAP LSAETVNQSL TSAPQVTLSP 360 FG

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MFHPKKASSM NSHERGVCVQ GDSGLVLTTD PKPRLRWTVE LHERFVDAVT QLGGPDKATP  60
KTIMRVMGVK GLTLYHLKSH LQKFRLGKQP HKEFNDHSIK DGMRASGLEL HRNTISSSNM  120
INRTMNEMQM EVQRRLHEQL EVQRHLQLRI EAQGKYMQSI LEKACQTLAG EDMAASGGYK  180
LMPGIPSNNN QQGVGDMGGG IKDFGTPLGF PSFQDLNLYG GHQLDLQQNV DGFMPHNDSL  240
LCLGKKKPRP PANYGSGKYA LDWPDDLRLQ GIGMTPPQQA DHEFKDINIV ATLAERGHLE  300
EMYEAKPVGS DESMLGDHKK YDTNDNASLK LQRPSPRRAP LSAETVNQSL TSAPQVTLSP  360
FG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-116	G2-like family protein