PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022961176.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 432aa MW: 47490.6 Da PI: 6.8703

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022961176.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.9	8.2e-32	228	283	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p+LH+rFv+a++ LGGs+ AtPk+i+elmkv+gLt+++vkSHLQkYRl+ XP_022961176.1 228 KARRCWSPDLHRRFVNALQMLGGSQAATPKQIRELMKVDGLTNDEVKSHLQKYRLH 283 68****************************************************97 PP
2	Myb_DNA-binding	40.5	6.3e-13	230	281	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W+++++ ++v+a ++lGg t+k I + m g+t ++ks++qky+ XP_022961176.1 230 RRCWSPDLHRRFVNALQMLGGSqaaTPKQIRELMKvDGLTNDEVKSHLQKYR 281 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MGSTELGANS DDYSLSYDKL HHFLSRLEEE RLKIDVFKRE LPLCMQLLTN AVETSRRQLQ 60 ACKTTGSAAA PVLEEFMPLK NATAAEDEKP ETVMSDKANW MTSVQLWSQA GDVSKHQSTI 120 NNNASTDHSK LEDCDNNNNN NNSVNCIQRR INHGAFVPFN KDRSSGGEKG AAAKMELLEK 180 GEKNNNKNEN NIIDGGVVMA VEQRFENGAA EVGLAPTMSS TTTQTHRKAR RCWSPDLHRR 240 FVNALQMLGG SQAATPKQIR ELMKVDGLTN DEVKSHLQKY RLHTRRPGPT LQASGPPAAQ 300 LVVLGLGGLW VPPEYAAAAG AATPSALYGP PPSSHQASHF YTPHLHHASL QHHHQVQLYT 360 GAPAQVTQSS PESEVRNTAE RSESFEEEKS GSSSWRIEGG ENGDERIKGR GSCGRRSEEG 420 EESNRSEITL KF

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MGSTELGANS DDYSLSYDKL HHFLSRLEEE RLKIDVFKRE LPLCMQLLTN AVETSRRQLQ  60
ACKTTGSAAA PVLEEFMPLK NATAAEDEKP ETVMSDKANW MTSVQLWSQA GDVSKHQSTI  120
NNNASTDHSK LEDCDNNNNN NNSVNCIQRR INHGAFVPFN KDRSSGGEKG AAAKMELLEK  180
GEKNNNKNEN NIIDGGVVMA VEQRFENGAA EVGLAPTMSS TTTQTHRKAR RCWSPDLHRR  240
FVNALQMLGG SQAATPKQIR ELMKVDGLTN DEVKSHLQKY RLHTRRPGPT LQASGPPAAQ  300
LVVLGLGGLW VPPEYAAAAG AATPSALYGP PPSSHQASHF YTPHLHHASL QHHHQVQLYT  360
GAPAQVTQSS PESEVRNTAE RSESFEEEKS GSSSWRIEGG ENGDERIKGR GSCGRRSEEG  420
EESNRSEITL KF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	1e-75	G2-like family protein