PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022960159.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bZIP

Protein Properties

Length: 436aa MW: 47973.9 Da PI: 6.2824

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022960159.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.6	6.3e-14	248	302	3	57
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 + +r+rr+ +NRe+ArrsR+RK+a + Le+ v +L ++L k+l +++++ XP_022960159.1 248 DARRARRMLSNRESARRSRRRKQAHLNDLETQVGQLRVDHSTLLKRLTDVNQKYD 302 579*****************************************99999988876 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MHTFFSSEDL LDSSFWSSPP PPSSSPPSHS PFRSRDPSLT MNRSASEWAL ERFLEEVSSL 60 PVNSYPSTTS NRVTVSPVDV ESPASQSSTS KRDEDDEIVE IKKADCDHDR SQPIPSLDPS 120 KMVRSDSDRY RVFLKNQLDM ACAAVARSRA SSSEPSPVQP AEHRGQTSSG FQFGLQAPGQ 180 VAVGSDRGTS TKESDANGSP LGIPSLPAMP KKQGIQTAQT TSGSSRDESD DDDLEGDIEN 240 SENMHPSDAR RARRMLSNRE SARRSRRRKQ AHLNDLETQV GQLRVDHSTL LKRLTDVNQK 300 YDDAAVDNRI LKADIETLRA KVKMSEETVK RLTGVNPLLV AMSQSQMPFV SSQMPMQSNS 360 QFFHQNMSAF GNSPPHHRNL EGPGGRSQND VATKMTDMAS VHHIIDDIDP VQKQAMHGPV 420 SGWDAETSHA APNQKN

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MHTFFSSEDL LDSSFWSSPP PPSSSPPSHS PFRSRDPSLT MNRSASEWAL ERFLEEVSSL  60
PVNSYPSTTS NRVTVSPVDV ESPASQSSTS KRDEDDEIVE IKKADCDHDR SQPIPSLDPS  120
KMVRSDSDRY RVFLKNQLDM ACAAVARSRA SSSEPSPVQP AEHRGQTSSG FQFGLQAPGQ  180
VAVGSDRGTS TKESDANGSP LGIPSLPAMP KKQGIQTAQT TSGSSRDESD DDDLEGDIEN  240
SENMHPSDAR RARRMLSNRE SARRSRRRKQ AHLNDLETQV GQLRVDHSTL LKRLTDVNQK  300
YDDAAVDNRI LKADIETLRA KVKMSEETVK RLTGVNPLLV AMSQSQMPFV SSQMPMQSNS  360
QFFHQNMSAF GNSPPHHRNL EGPGGRSQND VATKMTDMAS VHHIIDDIDP VQKQAMHGPV  420
SGWDAETSHA APNQKN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	263	270	RRSRRRKQ
2	265	270	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02640.2	1e-42	bZIP family protein