PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022959978.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family TCP
Protein Properties Length: 326aa    MW: 36777.4 Da    PI: 9.7174
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022959978.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP141.18.8e-44842043135
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaaks 97 
                      kkdrhski+T++g+RdRRvRls+e+ ++fFdLqd+LG+dk+skt++WLl+++ +aikelt++++++  ++           +s+  +a +++ +
  XP_022959978.1  84 MKKDRHSKIYTAQGLRDRRVRLSIEISRKFFDLQDMLGYDKASKTLDWLLTNSRKAIKELTNNNNNNLYNF-----------DSE-FEAHKSTLP 166
                     69*************************************************************44444222...........222.233345566 PP

             TCP  98 kksqksaasalnlakesrakarararertrekmriknk 135
                     k s+k+ a ++ lakesrakarararert+ek + k++
  XP_022959978.1 167 KCSNKNVAFHHVLAKESRAKARARARERTKEKIMSKSQ 204
                     7777777778**********************988865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MFSSTNNLHL FPLQHYFVPS SSSSSSYHQV VPPPPGPAVA SPANNVFVPQ DLQNPFVGVG  60
EEGRMKNEQE GQCYSSGVNK KSRMKKDRHS KIYTAQGLRD RRVRLSIEIS RKFFDLQDML  120
GYDKASKTLD WLLTNSRKAI KELTNNNNNN LYNFDSEFEA HKSTLPKCSN KNVAFHHVLA  180
KESRAKARAR ARERTKEKIM SKSQQPLPEI FSHQFRSPPP PPPPASSSSS SIPVVQKAAA  240
TSLDQENNII GIMWKPSPMI TKGDIYYNNC NNFYFPSNLP PNWDINVDSF ARPQSGFCSI  300
ANMDSLPEFQ VCAKPWDSCS NNQHLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.21e-28TCP family protein