PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022959061.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 550aa MW: 61077 Da PI: 6.328

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022959061.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	86.9	2e-27	103	156	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gL++e+v+SHLQkYRl XP_022959061.1 103 KPRVVWSVELHQQFVIAVDQL-GIDKAVPKKILELMNVPGLSRENVASHLQKYRL 156 79*****************.******************************8 PP
2	Myb_DNA-binding	36.2	1.4e-11	105	155	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av qlG + +k+I + m+ g++++++ s++qky+ XP_022959061.1 105 RVVWSVELHQQFVIAVDQLGIDkaVPKKILELMNvPGLSRENVASHLQKYR 155 678***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MSADDGKNVV MKGVIHGACD YLIKPVRIEA LKNIWQHVVR KRKSEWKDLE QSGSMDDGDR 60 DQNVSEGANY SSSAYDGSWN SSKRKRDAEE ELEERDDTSA LKKPRVVWSV ELHQQFVIAV 120 DQLGIDKAVP KKILELMNVP GLSRENVASH LQKYRLYLRR LSGVSPHPSN LNNSFMNPQD 180 HPPFGSMASS YNGIDLQTLL VTGQLSPQSL AALQATGLRR PTAKSSLPMA LVDQNNIFSF 240 ENPKLRFGED QTQHLNNTKP VSLFHGIPTK MEPKQLANMQ HPSVQTQRNM NMNMNMNMNM 300 ALNIKSEHGG TQLMHLSQQQ TVGQTLNNSN VTHLPGIPST LRNLIISGSV TTGNGTADNS 360 HGPRYNLVSP TSVMVNYPMS QTTEVFQEEM NSNLKVSSGV MSSYGVFSDL HMQKSHDWDS 420 QNVSTLAFGT PHHGNFIHHS FDISPSSLIH HGFPSSQTNG ENHNSSVNGK TNFSFLDSTQ 480 PGIPQSVDHN SFFDPGEVKN QIIPDASYQT DLLSEDFGQD ELLGVFLKQE QQEDNGSVDF 540 SGYQTENICV

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MSADDGKNVV MKGVIHGACD YLIKPVRIEA LKNIWQHVVR KRKSEWKDLE QSGSMDDGDR  60
DQNVSEGANY SSSAYDGSWN SSKRKRDAEE ELEERDDTSA LKKPRVVWSV ELHQQFVIAV  120
DQLGIDKAVP KKILELMNVP GLSRENVASH LQKYRLYLRR LSGVSPHPSN LNNSFMNPQD  180
HPPFGSMASS YNGIDLQTLL VTGQLSPQSL AALQATGLRR PTAKSSLPMA LVDQNNIFSF  240
ENPKLRFGED QTQHLNNTKP VSLFHGIPTK MEPKQLANMQ HPSVQTQRNM NMNMNMNMNM  300
ALNIKSEHGG TQLMHLSQQQ TVGQTLNNSN VTHLPGIPST LRNLIISGSV TTGNGTADNS  360
HGPRYNLVSP TSVMVNYPMS QTTEVFQEEM NSNLKVSSGV MSSYGVFSDL HMQKSHDWDS  420
QNVSTLAFGT PHHGNFIHHS FDISPSSLIH HGFPSSQTNG ENHNSSVNGK TNFSFLDSTQ  480
PGIPQSVDHN SFFDPGEVKN QIIPDASYQT DLLSEDFGQD ELLGVFLKQE QQEDNGSVDF  540
SGYQTENICV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-101	ARR-B family protein