PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022958755.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 517aa MW: 56779 Da PI: 5.3048

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022958755.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44	4e-14	304	350	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + Er+RR ++N+++ Lr+l+P++ +K + a+i+ A++YIk+L XP_022958755.1 304 TKHFATERQRRVQLNDKYKALRSLVPSP-----TKTDRASIVGDAINYIKEL 350 78************************.....9**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 517 aa Download sequence
MYEETACSDP NSMSAEPTPP VVPDASQNGF PQTMAHIPAL PSFPPPPPLI VAGGQDTHAN 60 FDDNNLNLSM EEISYHHHHR SGGGGDAMEL EFQQQGVGFD NCNMNPSFGQ EVSSDSNRMV 120 CLDQSAWVGS QIQEMGFNHH LIQSQDHQFS DSAMAAAYTQ APDLLNFFNM PAARCSNNSS 180 ISFSNNTISN LHSSAMGGFL ADLPAGDGSN PSSTSLSILY DPLFHLNLPP QPPLFRELFH 240 SLPHGYGLPA ASSRGRGGSL FPEGEIMERE GTAGVYEDGD GSGVLEFSRD MADCIGKGRD 300 GKMTKHFATE RQRRVQLNDK YKALRSLVPS PTKTDRASIV GDAINYIKEL LREVKELKLL 360 VEKKRCSRER SKRHRTAEED GGAWDVESSN AKTGAVGDGG EDQSYNLRSS WLQRKTKDTE 420 VDVRIVDDEV TIKLVQRKLN CLLLVSKLLD DLQLDLHHVA GGHIGDYYSF LFNTKIYEGS 480 SVYASAIANK VMEAVDRQYN NTNNTANTSI TPHTNTY

Sequence ? help Back to Top

Protein Sequence Length: 517 aa Download sequence

MYEETACSDP NSMSAEPTPP VVPDASQNGF PQTMAHIPAL PSFPPPPPLI VAGGQDTHAN  60
FDDNNLNLSM EEISYHHHHR SGGGGDAMEL EFQQQGVGFD NCNMNPSFGQ EVSSDSNRMV  120
CLDQSAWVGS QIQEMGFNHH LIQSQDHQFS DSAMAAAYTQ APDLLNFFNM PAARCSNNSS  180
ISFSNNTISN LHSSAMGGFL ADLPAGDGSN PSSTSLSILY DPLFHLNLPP QPPLFRELFH  240
SLPHGYGLPA ASSRGRGGSL FPEGEIMERE GTAGVYEDGD GSGVLEFSRD MADCIGKGRD  300
GKMTKHFATE RQRRVQLNDK YKALRSLVPS PTKTDRASIV GDAINYIKEL LREVKELKLL  360
VEKKRCSRER SKRHRTAEED GGAWDVESSN AKTGAVGDGG EDQSYNLRSS WLQRKTKDTE  420
VDVRIVDDEV TIKLVQRKLN CLLLVSKLLD DLQLDLHHVA GGHIGDYYSF LFNTKIYEGS  480
SVYASAIANK VMEAVDRQYN NTNNTANTSI TPHTNTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	4e-54	bHLH family protein