PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022957555.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 376aa MW: 39987 Da PI: 9.1986

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022957555.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	130.3	1.9e-40	56	178	2	105
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 ++k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ ++ XP_022957555.1 56 PPKRATTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSTVLAPshlrtsy 150 789******************************************************************99976666666666222224444556 PP TCP 89 .................kaaksaakskksqksaa 105 + ++++++++++ XP_022957555.1 151 fsptqfavrtrsdlwdrS------NNNNNHNHNN 178 666666554433222110......1111111112 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MIMDGENGIR RPNFPLQLLE KKEEEHPCST SANNGTTTTT TTVNPNLQSS SPKKPPPKRA 60 TTKDRHTKVD GRGRRIRMPA LCAARVFQLT RELGHKSDGE TIEWLLQQAE PAVIAATGTG 120 TIPANFTSLN ISLRSSGSTV LAPSHLRTSY FSPTQFAVRT RSDLWDRSNN NNNHNHNNNN 180 NTLVDDSSTF FNFNSPNYIN AFKHDQGGID VTDAGKKRRP ENSESSSENP VGNYLVQSST 240 GSIPASHSTP VPATFWMVTN PSNQASDPMW TFPSVSNSSM FRGGSGGGGG GGGGGFHFMN 300 LPPPMALLPT GQQVGSGIGG GSGCPATDTH LGMLAALSAY RTIPGVSISE SPTRGAAAVH 360 RGGNEAHDST SNRDQS

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MIMDGENGIR RPNFPLQLLE KKEEEHPCST SANNGTTTTT TTVNPNLQSS SPKKPPPKRA  60
TTKDRHTKVD GRGRRIRMPA LCAARVFQLT RELGHKSDGE TIEWLLQQAE PAVIAATGTG  120
TIPANFTSLN ISLRSSGSTV LAPSHLRTSY FSPTQFAVRT RSDLWDRSNN NNNHNHNNNN  180
NTLVDDSSTF FNFNSPNYIN AFKHDQGGID VTDAGKKRRP ENSESSSENP VGNYLVQSST  240
GSIPASHSTP VPATFWMVTN PSNQASDPMW TFPSVSNSSM FRGGSGGGGG GGGGGFHFMN  300
LPPPMALLPT GQQVGSGIGG GSGCPATDTH LGMLAALSAY RTIPGVSISE SPTRGAAAVH  360
RGGNEAHDST SNRDQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	6e-48	TCP family protein