PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022957514.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 303aa MW: 34727.5 Da PI: 6.9096

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022957514.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.9	7e-18	85	138	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k XP_022957514.1 85 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 138 456899***********************************************9 PP
2	HD-ZIP_I/II	130.6	6.4e-42	84	175	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl+ eqvk+LE++Fe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr+++a+k++ne+L++++++L++e++ XP_022957514.1 84 EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAIKSDNEALKSQNQKLQAEIM 175 69**************************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MTSNGMAFFP ANFMLQTSHE DHDHHHHSSP PSLNPILPSC TSQDFHGVAS FLGKRSMSFS 60 GAEMVEEGNN GEDEFSDDGS QAGEKKRRLN MEQVKTLEKN FELGNKLEPE RKMQLARALG 120 LQPRQIAIWF QNRRARWKTK QLEKDYDLLK RQFEAIKSDN EALKSQNQKL QAEIMGLKSR 180 EPTESINLNK ETEGSCSNRS ENSSDNIKLD ISRTPAIDSP HQHQHQHPTN RPLFPTSSLR 240 PPALAQLFQT SSRSSDPPKQ LDNNNHHHHH QMPKEENTSL SNMFCGMDDH SGFWPWLEQQ 300 HFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	133	141	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	1e-122	HD-ZIP family protein