PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022957369.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 330aa MW: 34484.7 Da PI: 10.0184

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022957369.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	122.5	4.9e-38	113	206	3	93
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg....kaaks 93 +kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++a+++ ++s s+ ++ s + ++ +s XP_022957369.1 113 VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFS-SVSLSVRGNGGSTSlsspSSTTS 206 79******************************************************************888.23333333322222322222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MCPPSVATSS CLSQSLALFS SRITPFINKT LLSLSLSLSL SLSLYHRPWQ PLLPPSNPSS 60 VISSPASISE QSTEVCIFFF MSNSDSGNTN GVSNGAAVDT HKNQPSSNGA LVVKKPPSKD 120 RHSKVDGRGR RIRMPIICAA RVFQLTRELG HKSDGQTIEW LLRQAEPSII AATGTGTTPA 180 NFSSVSLSVR GNGGSTSLSS PSSTTSTLSL SRPQALSGPT PFILGKRVRS DDDGGKDDGA 240 GVGPTGPGGY WAIPARPDYG QVWSFAAAAP SEMVVQPGGI SQQASLFAQP QQPIREASAA 300 RVGNYLPSHL NLLASLSGGG GSGRREDDPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	2e-62	TCP family protein