PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022956117.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 301aa    MW: 33021.3 Da    PI: 5.9441
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022956117.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.11.9e-1752100355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + GVr+++ +gr++AeIrdp++   + r++lg+f+ta eAa a+++a+++++g
  XP_022956117.1  52 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAHEAAMAYDRAALSMKG 100
                     56******.**********965...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MATSKASDKA YPVHEIAQTQ MGFALIQRNS SQTSQTAGER RGRRKQGEPG RFLGVRRRPW  60
GRYAAEIRDP TTKERHWLGT FDTAHEAAMA YDRAALSMKG TQARTNFIYS DTSTFHSLLT  120
AFDAQSLLPN SVLSHSKMVT PNKNNKNNNI PFTQSLPSNP CFDDLDTNFL FSNDSNSGYL  180
SCIVPDNCLK PPSDSTTSND LQKLSFFASN SIDSQGLDGS AMAYSSSNDG VWDEQQIWKS  240
NGDELSAIIN SSSSSSSMVA ENGDFHPFMN SSYGGLLPQS STCSTYAPPF GDVFDFGYPL  300
L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.13e-66ERF family protein