PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022955556.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GRF

Protein Properties

Length: 354aa MW: 39713.1 Da PI: 7.7271

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022955556.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79.4	3.3e-25	107	150	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++ +++k+CE+H+hrgr+rsrk++e XP_022955556.1 107 DPEPGRCRRTDGKKWRCSKEAFPDSKYCEKHMHRGRNRSRKPVE 150 79***************************************997 PP
2	QLQ	62.1	1.5e-21	41	76	1	36
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 s+FT++Q+q+L++Q+l++Ky+++++P+Pp+L++ ++ XP_022955556.1 41 SPFTPTQWQELEHQALIFKYMVSGVPIPPDLIFSVK 76 89******************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MNFAEIPIKK LAPPKNNVPS TSLSFKLSRT MNSSPKTCTT SPFTPTQWQE LEHQALIFKY 60 MVSGVPIPPD LIFSVKRSLD SSLSARLFPH QPIGWGCFEM GFGRKTDPEP GRCRRTDGKK 120 WRCSKEAFPD SKYCEKHMHR GRNRSRKPVE ISSSSSSSSS SSSMTCETQS YHQAPPPAAA 180 AYHESSIHPF MYTQSSSSRP PCSDFPSNNT NPQLFLYSGT HSQADKDYRD INGSREGVGV 240 QAFFPSVAEV YNNQQPIAMD SYKGCSQFVT QSHQIYNSKQ ARQEQEQHCF VLGTDFNKSS 300 KSAKAEEEEQ EQEQDGETQK PLLHFFEDCP PKNSDSWLDL ASNSSIQNGN FIGL

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MNFAEIPIKK LAPPKNNVPS TSLSFKLSRT MNSSPKTCTT SPFTPTQWQE LEHQALIFKY  60
MVSGVPIPPD LIFSVKRSLD SSLSARLFPH QPIGWGCFEM GFGRKTDPEP GRCRRTDGKK  120
WRCSKEAFPD SKYCEKHMHR GRNRSRKPVE ISSSSSSSSS SSSMTCETQS YHQAPPPAAA  180
AYHESSIHPF MYTQSSSSRP PCSDFPSNNT NPQLFLYSGT HSQADKDYRD INGSREGVGV  240
QAFFPSVAEV YNNQQPIAMD SYKGCSQFVT QSHQIYNSKQ ARQEQEQHCF VLGTDFNKSS  300
KSAKAEEEEQ EQEQDGETQK PLLHFFEDCP PKNSDSWLDL ASNSSIQNGN FIGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	4e-68	GRF family protein