PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022955094.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WOX
Protein Properties Length: 296aa    MW: 33115.2 Da    PI: 7.4622
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022955094.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox68.49.1e-2270129357
                     --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                     +R+++t+eql+ Leel+++ +r+psae++++++++l    +++ ++V++WFqN++a+e++
  XP_022955094.1  70 SRWNPTPEQLRLLEELYRRgTRTPSAEQIQHITAQLrrfgKIEGKNVFYWFQNHKARERQ 129
                     7*****************99**************************************97 PP
2Wus_type_Homeobox116.21.6e-3769131365
  Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        ++RW+PtpeQ+++Leely++G+rtP++e+iq+ita+L+++Gkie+kNVfyWFQN+kaRerqk+
     XP_022955094.1  69 SSRWNPTPEQLRLLEELYRRGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKR 131
                        79***********************************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MNMWMMGYND GGDLNFSSDS FNARKLRPLI PRPLSSPSTN DFFSQFYQMG TDQSKRELNN  60
APPPPVVVSS RWNPTPEQLR LLEELYRRGT RTPSAEQIQH ITAQLRRFGK IEGKNVFYWF  120
QNHKARERQK RRRQMESSDQ SICDIEILER KDSGSGRTVY EVEHTKNWPT STNCRTLVEE  180
SLPIPRAPKD STMTQNGSLH STAATPGGVG VGGIGGCRQL MMNTAPIAAT TTTATVTTIM  240
HQDDGVEGLE ESETLQLFPL CSETRNGGCE TVGSSGMNSA NVMTPLQFFE FLPLKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18010.18e-39WOX family protein