PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022955078.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 305aa    MW: 34518.9 Da    PI: 6.7031
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022955078.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.72.3e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +l+d++++ G g+W+  ++  g+ R++k+c++rw +yl
   XP_022955078.1 14 KGPWTPEEDHKLLDYIQKNGHGNWRNLPKNAGLQRCGKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding53.65.1e-1767111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rgr++ eE+e +++++  lG++ W++Ia +++ gRt++++k++w+++
   XP_022955078.1  67 RGRFSFEEEETIIQLHSVLGNK-WSAIATRLP-GRTDNEIKNYWNTH 111
                      89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MGRTPCCDST GLKKGPWTPE EDHKLLDYIQ KNGHGNWRNL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHSVLGNKWS AIATRLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHSPRL DLLDLSAILR STLYSSSQMK VSSLLGIQPL VNPELLKLAA SLMSSERRSP  180
SFSPQNSSPT IQFPHEQQLV EPTGSEFNDE WLSGPILPSC LNLDANFELL GYDYHGLDQQ  240
ELAPTLCSVE GKNKNKNLCS PCSSSPTQMN SNSTNFTSAA EDEKESYCSQ ILNFELHDIF  300
DEAFM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.11e-105MYB family protein