PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022954993.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 290aa MW: 32767.5 Da PI: 4.7082

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022954993.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.1	7.2e-19	99	152	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t++q++ Le+ Fe ++++ e++ +LAk l+L+ rqV +WFqNrRa++k XP_022954993.1 99 KKRRLTSDQVRFLEKSFEIDNKLELERKVQLAKDLELQPRQVAIWFQNRRARWK 152 56789************************************************9 PP
2	HD-ZIP_I/II	122.7	1.8e-39	98	188	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+++qv++LE+sFe ++kLe erKv+la++L+lqprqva+WFqnrRAR+ktkqlEkdyeaL+++y +lk e e+L ke+++L++++ XP_022954993.1 98 EKKRRLTSDQVRFLEKSFEIDNKLELERKVQLAKDLELQPRQVAIWFQNRRARWKTKQLEKDYEALQSSYGSLKVEYEKLLKEKDSLKAKI 188 69**************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MAVRRVYGGG DDGGSISGAS NHTVFLQNRK GSFASEPLNA LFVSGSSSST SPSMLGSKSM 60 ISFKDIHGQN GSTRPFFCSF DTEDNGNEDL DDYFHHPEKK RRLTSDQVRF LEKSFEIDNK 120 LELERKVQLA KDLELQPRQV AIWFQNRRAR WKTKQLEKDY EALQSSYGSL KVEYEKLLKE 180 KDSLKAKILV LTDKLLLKAK EKGSSVVSEV DKSSDIFDTD SPLVEPRDSS YIFDPDQSDL 240 SQDEDDNTGK NLLPTYVFPK LEDVDYLDPP ASACSFVFPI DEDTALWSWS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	147	155	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	2e-35	HD-ZIP family protein