PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022954992.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 292aa MW: 32979.8 Da PI: 4.7082

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022954992.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.1	7.3e-19	101	154	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t++q++ Le+ Fe ++++ e++ +LAk l+L+ rqV +WFqNrRa++k XP_022954992.1 101 KKRRLTSDQVRFLEKSFEIDNKLELERKVQLAKDLELQPRQVAIWFQNRRARWK 154 56789************************************************9 PP
2	HD-ZIP_I/II	122.7	1.8e-39	100	190	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+++qv++LE+sFe ++kLe erKv+la++L+lqprqva+WFqnrRAR+ktkqlEkdyeaL+++y +lk e e+L ke+++L++++ XP_022954992.1 100 EKKRRLTSDQVRFLEKSFEIDNKLELERKVQLAKDLELQPRQVAIWFQNRRARWKTKQLEKDYEALQSSYGSLKVEYEKLLKEKDSLKAKI 190 69**************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MAVRRVYGGG DDGGSISGAS NHTVFLQNRK GSFASEPLNA LFVSGSSSST SPSMLVIGSK 60 SMISFKDIHG QNGSTRPFFC SFDTEDNGNE DLDDYFHHPE KKRRLTSDQV RFLEKSFEID 120 NKLELERKVQ LAKDLELQPR QVAIWFQNRR ARWKTKQLEK DYEALQSSYG SLKVEYEKLL 180 KEKDSLKAKI LVLTDKLLLK AKEKGSSVVS EVDKSSDIFD TDSPLVEPRD SSYIFDPDQS 240 DLSQDEDDNT GKNLLPTYVF PKLEDVDYLD PPASACSFVF PIDEDTALWS WS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	149	157	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	1e-36	HD-ZIP family protein