PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022954575.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 316aa    MW: 36154.2 Da    PI: 4.6993
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022954575.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.42.3e-1593140354
             AP2   3 ykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                     ykGVr++k +g+++AeIrd +     r +r +lg++ taeeAa a+ + + ++e
  XP_022954575.1  93 YKGVRRRK-WGKYAAEIRDpF-----RgRRLWLGTYNTAEEAAGAYQRKKHEFE 140
                     9****998.**********66.....56***************99988877765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MYGKEEKKMK QLREGKSISV RKVRVLFHDP DATDYSSEED EHVNQDAKNI VWEISVPDIR  60
HKISKESSHG GKIRTKTEVK ASSSRTQRSS SMYKGVRRRK WGKYAAEIRD PFRGRRLWLG  120
TYNTAEEAAG AYQRKKHEFE SMQLMAKGSG ELGREQPEEK SGSVADFTDE SENIIALFSH  180
PSPSSVLDVC SESLCSNVDQ TMEHSITEGC MPVVDDEDIL KSIYEDERSI LDIMEATPTP  240
ITLPRLDTQE LDFQVLGDNS LVFNDFDQFF HDTNFRDNYT LHSIENSVGA LDLPPMDMEF  300
DKEFSWFDDT MSISCM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
194100KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.16e-22ERF family protein