PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022954499.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family BES1
Protein Properties Length: 328aa    MW: 35429.3 Da    PI: 8.7241
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022954499.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822209.21.1e-6421471150
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     +++ r+ptwkErEnnkrRERrRRaiaaki+ GLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp  e +++g sasasp+ss+q
  XP_022954499.1   2 TSGNRMPTWKERENNKRRERRRRAIAAKIFLGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPV-ERDIMGGSASASPCSSYQ 95 
                     5789************************************************************************.99**************** PP

          DUF822  96 sslkssalaspvesysaspksssfpspssldsislasa.....asllpvlsvlslvsssl 150
                             +sp +sy++sp+sssfpsp+s+  + + +      +sl+p+l++ls+ sss+
  XP_022954499.1  96 --------PSPYTSYNPSPASSSFPSPTSSRYAIIGNGntadpNSLIPWLKNLSSGSSSA 147
                     ........*******************9988877665567888**********9977664 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MTSGNRMPTW KERENNKRRE RRRRAIAAKI FLGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WTVEEDGTTY RKGCKPVERD IMGGSASASP CSSYQPSPYT SYNPSPASSS FPSPTSSRYA  120
IIGNGNTADP NSLIPWLKNL SSGSSSASSR LPHYNHYITG GSISAPVSPP SSSPTARTPR  180
KPNDWDNHPA AAPAWAAQHF SCMATPPSPG RQAWHDSMRI PQSGPSSPTF SLVARNPFGF  240
KEAMSAGGSR NWTPAQSGTC SPTVTAGADH TSDVLMTDES VAEFAFGSCS VGLVKPWEGE  300
RIHEECISDD LELTLGNSRT RVNPVTSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.13e-80BES1 family protein