PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022954072.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 296aa    MW: 33239.4 Da    PI: 8.3828
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022954072.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.42.9e-06128147120
                     EEETTTTEEESSHHHHHHHH CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                     ++Cp C+k F+r  nL+ H+
  XP_022954072.1 128 FSCPLCSKAFNRYNNLQMHM 147
                     89*****************9 PP
2zf-C2H214.50.0001212234123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C +C+k F  k + ++H +++
  XP_022954072.1 212 FTCRKCTKAFAVKGDWRTHEKNC 234
                     89*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MTDPNHSNSF NFIPLPSSPP SNSGFSQCRH RPPSPPPPQA LPLLNTFSAE TTDHPSSSTS  60
YEHDSPPLAL DFSLSCPSSN LDYSRSISPD PTGKTLDGDI SDHPLPISGK GQFWIPTPSQ  120
ILIGPTQFSC PLCSKAFNRY NNLQMHMWGH GSQYRKGPES LKGTQPTAML KLPCYCCAPG  180
CKHNIDNPRS RPLKDFRTLQ THYKRKHGIK PFTCRKCTKA FAVKGDWRTH EKNCGKIWYC  240
FCGSDFKHKR SLKDHIKAFG RGHGALGLDY FDDDNEPGSE LEHEQHEPQL LFHLHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57670.11e-112C2H2 family protein