PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022953365.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family FAR1
Protein Properties Length: 211aa    MW: 24052.4 Da    PI: 9.1885
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022953365.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR182.66.6e-2643132190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     kfY eYA+++GF vr+ + ++s  +g++  r++ C+k+g++ +++      +++r++ r gCka++ vk+ek+gkw+vt+++++HnH+l+
  XP_022953365.1  43 KFYAEYARQMGFVVRIMQRRRSGIDGRTLARRLGCNKQGFSPNHRGIYGLDKKSRPSAREGCKATILVKMEKSGKWVVTRFVKDHNHPLV 132
                     6****************************************999998899**************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MNLDDGSGPA HNAIEVNIHA AEGNVILEPY VGMEFDSEDA ARKFYAEYAR QMGFVVRIMQ  60
RRRSGIDGRT LARRLGCNKQ GFSPNHRGIY GLDKKSRPSA REGCKATILV KMEKSGKWVV  120
TRFVKDHNHP LVVCSNGFNS SGDKDKKIEE LKTELEHQEQ LCIAYREKLF NFISKVEEQT  180
EELSSKIQVI ISNLRQVESG IQKHYPCRRP Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12850.15e-72FAR1 family protein