PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022953161.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YB
Protein Properties Length: 157aa    MW: 17117.1 Da    PI: 4.8932
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022953161.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB170.91.4e-5346142197
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                     v+eqdr+lPianv+rimk++lP nakisk+aket+qecvsefisfvt+easdkc++ekrkt+ngdd++ alatlGf+dy+epl+ yl +yre+eg
  XP_022953161.1  46 VKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICCALATLGFDDYAEPLRRYLIRYREIEG 140
                     58********************************************************************************************* PP

           NF-YB  96 ek 97 
                     e+
  XP_022953161.1 141 ER 142
                     97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MDDNTPMPER LVEFKYDFTT GGGSGGVGGS TGGSSEEAGS GIGGFVKEQD RLLPIANVGR  60
IMKQILPPNA KISKEAKETM QECVSEFISF VTGEASDKCH KEKRKTVNGD DICCALATLG  120
FDDYAEPLRR YLIRYREIEG ERAQQNKGCC NNNTHDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.16e-59NF-YB family protein