PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022952144.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 388aa    MW: 43547.6 Da    PI: 6.4172
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022952144.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.7e-19191241256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  XP_022952144.1 191 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAAMAYDREAFKLRGE 241
                     59******9.**********955...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MAEDKKTGKS KMVLDERTPQ LKFSKKKIDK GKEQWKPVLD DAFLSRRPLK KFCSSDFQNP  60
FLQSPVSVSP PSKIQFPFDF QASQQSTTTT TTTQFVSSSS SSSSSSSHFP AFGSPEQQMI  120
SFSSNQQQGI GYPPYFLGGG DPVATQQRLF KYWSDAFHLS PRGRAMMMSR MGPDGCHLFG  180
PPVQPLSATK LYRGVRQRHW GKWVAEIRLP RNRTRLWLGT FDTAEDAAMA YDREAFKLRG  240
ENARLNFPER FLNKNTPKTE TKTEHTNPIT EEAHEDSAVV LPPSEEEKPD ELLTESVGAS  300
EAPEMVWGEM EEAWFNAIPA GWGPGSAVWD HLDPTNNLVL QSQFPFGSSN QPQIKDSDDN  360
QNKVENSESA SSSSSSAPMK LFLWKDQD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.15e-55ERF family protein