PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022951739.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family SRS
Protein Properties Length: 298aa    MW: 32331.7 Da    PI: 8.0344
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022951739.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702195.22.2e-60852183153
          DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaesk 97 
                     +g+++CqdCGnqakkdCa+ RCRtCCksrgf+C+thvkstWvpaakrrerq +            + ++skr re+  ++++a+++ +l+s+   
  XP_022951739.1  85 AGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQFR------------SGDNSKRLRET--QSATATATPRLPSS--- 162
                     6899*********************************************9654............34567777775..55666666666665... PP

          DUF702  98 keletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153
                      ++e +++P+ev+s+avfrcv+vs++dd++ee+aYqtav+igGhvfkGiLydqG e
  XP_022951739.1 163 FTSELEKFPSEVNSPAVFRCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSE 218
                     566999************************************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MAELFYVGGR EEGPPNKEEQ QQHKQTQPTL FMYRNDQQIH HKGFEIWPPH YQTHFSSAVG  60
QSRRTDSDHP SRSAFTATRP AAATAGGINC QDCGNQAKKD CAYLRCRTCC KSRGFHCQTH  120
VKSTWVPAAK RRERQFRSGD NSKRLRETQS ATATATPRLP SSFTSELEKF PSEVNSPAVF  180
RCVKVSAMDD EDEEFAYQTA VNIGGHVFKG ILYDQGSEVH YTAGESSSGH GGDGSVHPLN  240
LIAGPSNAAA ASTTTSAATS SNPTATAAAV APLLDPSIYP APLNAFMAGT QFFPPSRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75520.14e-71SRS family protein