PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022951064.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 282aa MW: 30964.2 Da PI: 6.4005

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022951064.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.1	7.5e-33	142	199	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers+edp+vv++tYeg+H h+ XP_022951064.1 142 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTVVITTYEGQHCHH 199 8******************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MDRDPPPNFS TADSSTNWTS SSLASASVDA DYLLSGDSET TILTEFGWNF DSDEVQPSRF 60 LDSDQIATDY NADFAGTSTG SLQSPDVPVP LASNPSLSSS SSGEPPEKQP EIPRNKVKKK 120 GQKRIRQPRF AFMTKSEVDH LEDGYRWRKY GQKAVKNSPF PRSYYRCTNS KCTVKKRVER 180 SSEDPTVVIT TYEGQHCHHT VGFPRGGGLN MAHEPAFGTQ FSPHMAQFFY PEPHPPPTIT 240 PPNAPNLPSV APSQAEPTNS SPQVASDEGL LGDVVAPGMR RR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69310.2	1e-62	WRKY family protein