PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022950844.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 236aa    MW: 26671.1 Da    PI: 10.9861
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022950844.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.11.8e-0955105353
                     HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIks 53 
                     ++h  +E+ RR+ri   +++Lr +lP+   k++  Kl Ka +L ++++ +k+
  XP_022950844.1  55 QKHRLAEQSRRNRISGQYDTLRAILPSiY-KTDMSKLKKAFVLSETIRMVKE 105
                     68*************************55.9****************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MVLLHQSGQV MQSIQSYPTS GTMHQMYPQG QPLMIKHYSP ISSFPRKENT LHAAQKHRLA  60
EQSRRNRISG QYDTLRAILP SIYKTDMSKL KKAFVLSETI RMVKEFKKLV SEKRATNREV  120
GNCGIPGGAD RLSLEHCDGG EGMVKAVMSC EDRPNIMAEL AKALKTVKVK LVRAEMVTMG  180
GRNKFSLWMQ GPKEGPGVLK RVLEAVMRRP SWIARKHRSS WHSRASTAYN FNRATS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38070.12e-22bHLH family protein