PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022950200.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 358aa    MW: 39523.1 Da    PI: 5.1595
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022950200.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.18.4e-052562881754
                     HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      ++   L++l+ +      +K + a++L +A+eYIk L
  XP_022950200.1 256 GDRVTALQQLVSPF-----GKTDTASVLHEAIEYIKFL 288
                     55666677777776.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MAEDFQAAIC GDNWWSSSRT MLVAVGGLSP CSMGIGDLAW PPADDFSDIK PKSTANYSDN  60
QNSMFFQDYS TSDHWNQPHD LLLKRGDYLL EQNGVNCMNC CSSTSQGLFP LDSALYGYPS  120
PSTKLLHGLY NNDNDDDDDH PDPHSLFNAA TTPINTNYPS NYLIKPSLPI PPPSQPVSPA  180
LHFTNNTPFW NASHAPPSIE IPQNSRLGFK AMNNGNCEDG EEARKGDKNE PPVLKRPRIE  240
TPSPLPTFKV RKEKLGDRVT ALQQLVSPFG KTDTASVLHE AIEYIKFLHD QVSLLSTPYM  300
KNNNGITPVQ QQQVSEKADP KQDLKSRGLC LVPISSTFPV TNATTADFWS PTFGGTFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.11e-56bHLH family protein