PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022949123.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 329aa    MW: 36457.4 Da    PI: 5.8204
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022949123.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH56.35.8e-183786255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    r +h+e E+rRR++iN++f+ Lr+l+P++    ++K +Ka+ L +++eYI+ Lq
  XP_022949123.1 37 RSKHSETEQRRRSKINERFQILRDLIPQN----DQKRDKASFLLEVIEYIQFLQ 86
                    899*************************9....9*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MVKTSKSVQE RFEDDGNGEL RVKIEGKGGD SKASDHRSKH SETEQRRRSK INERFQILRD  60
LIPQNDQKRD KASFLLEVIE YIQFLQEKLN LYEGSCQGWS PEPSKLMPWN YRASENYVDH  120
SQVIKSGSSH ENAVFSQPML TNASNVMDAD LGPAAVLNAV DHALVSASQE LPMSMRAQPV  180
VFDSVGRGSL STETLDEPAS GSENISSKTQ TESFQGRTST STGFRNHAVS DREDLTMESE  240
LESISGAYSH GLLNTLTQAL QASGVDLSQT NISVKVDVGK RANRAMSMSE IFHQDDKKQS  300
MNNQVVAESL HGCFTENTEQ AHKKLRTGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.13e-54bHLH family protein