PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022948450.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 268aa    MW: 28986 Da    PI: 7.3873
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022948450.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.0002185107123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_022948450.1  85 FSCNYCQRKFYSSQALGGHQNAH 107
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MYLPISEPSP SESSTIISAS ESSPPCPKED QATDQINQNS QLGFDLSLCN NDSDHGSNPE  60
LNLIDCFDAN LAAEPTDTET EPRVFSCNYC QRKFYSSQAL GGHQNAHKRE RTLAKRTHRV  120
GSGSNFGFAH RYSNLPSLHL HGSFSRSLGI QAHSMVHKPS SFHVSGIGSS GIYGHSGWSR  180
QPLDQQPAIG RLPQGSSHIG SLRCITSNTG AARFDGVKKF STTETPPPLE GFWWDSSGSG  240
SGGGGGFSHL KMKPKQDELL KLDLSLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.11e-41C2H2 family protein