PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022948309.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 366aa MW: 40423.8 Da PI: 9.3759

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022948309.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.4	1.3e-32	212	265	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave+LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_022948309.1 212 PRMRWTTSLHARFVHAVEHLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 265 9****************************************************7 PP
2	Myb_DNA-binding	48.7	1.8e-15	213	264	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av+ lGg+ t+k++ + m k +tl ++ks++q+y+ XP_022948309.1 213 RMRWTTSLHARFVHAVEHLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 264 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MPLEGVFIEP SSTPLPDLSL QISPPNASSS SSSSSNSSSI KTLTHGFPQT NFDLLSNSDN 60 PRAHTDLSLG TNNDLPGRAP LPPPLHHLRG VSGFDVSDRL RPIKGIPVYH NRPFPFLAVD 120 QKDHRYHHHP HQNHHQFSSF YPNYPNPNGV LQTGYRNSAA RFNNGTVSVE GIKSLHSNSN 180 AASSSSDVCS HGMMMRSRFL QKLPPKRSMR APRMRWTTSL HARFVHAVEH LGGHERATPK 240 SVLELMDVKD LTLAHVKSHL QMYRTVKTTD KPAASSGQSD GSGDDDVSPT ICTGRGDNAP 300 RQFSDQRAPL ERSGQPPPDL EFGSSTLWSN SSRDVWPQTN SNETDVIRSN SSTQMQQKPM 360 HQIEVQ

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MPLEGVFIEP SSTPLPDLSL QISPPNASSS SSSSSNSSSI KTLTHGFPQT NFDLLSNSDN  60
PRAHTDLSLG TNNDLPGRAP LPPPLHHLRG VSGFDVSDRL RPIKGIPVYH NRPFPFLAVD  120
QKDHRYHHHP HQNHHQFSSF YPNYPNPNGV LQTGYRNSAA RFNNGTVSVE GIKSLHSNSN  180
AASSSSDVCS HGMMMRSRFL QKLPPKRSMR APRMRWTTSL HARFVHAVEH LGGHERATPK  240
SVLELMDVKD LTLAHVKSHL QMYRTVKTTD KPAASSGQSD GSGDDDVSPT ICTGRGDNAP  300
RQFSDQRAPL ERSGQPPPDL EFGSSTLWSN SSRDVWPQTN SNETDVIRSN SSTQMQQKPM  360
HQIEVQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	5e-55	G2-like family protein