PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022946431.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 241aa MW: 28113.2 Da PI: 6.3171

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022946431.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.2	1.2e-15	14	60	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + W +eEd++l ++v+ +G g+W+t++++ g+ R +k+c++rw +yl XP_022946431.1 14 NLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60 56*******************************************97 PP
2	Myb_DNA-binding	53.9	4e-17	66	111	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l XP_022946431.1 66 RGEMSKEEEDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 111 8999****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MEESKEMKQQ LKKNLWKPEE DLILRNYVET HGEGNWATVS QESGLMRGGK SCRLRWKNYL 60 RPNIKRGEMS KEEEDLIIRM HKLLGNRWSL IAGRLPGRTD NEVKNYWNTH LNKNGLQDKR 120 KANDSNSHKK NDDDNDDDVN NKKQKKVINQ TGYPQPPICI DNGINLAHDT QRRNQEEKRE 180 VTEPWNMDDI TSSHYNINSP IVPANDATFN FDDEPYFDHL DPFFLLEAFG CSSVHASLDN 240 M

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	1e-63	MYB family protein