PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022945525.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 200aa    MW: 22697.8 Da    PI: 9.1013
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022945525.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44.2e-1978127255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+G+r+++ +g+W+AeIrdp +     r++lg++ tae+Aa+a+++a+ +++g
  XP_022945525.1  78 QYRGIRRRP-WGKWAAEIRDPQK---GFRVWLGTYNTAEDAARAYDQAAIRIRG 127
                     6********.**********943...39************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MCGGAMASDF VPPKASGKSV VNNHLWPQLD TFSDLSGKTD PNNPANRLEV QSRLSQGEKP  60
EEFEAGEKEK VKRVRKNQYR GIRRRPWGKW AAEIRDPQKG FRVWLGTYNT AEDAARAYDQ  120
AAIRIRGKKA KLNFTHPPPP PPPPQPPLPL QPQPLATPTD VELKDQISRL ESFLCLDPEP  180
TPDLWWVDEL LAYQEQNRIL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17286KRVRKNQYRGIRRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.16e-29ERF family protein